SimpleSearch - Line and FST details


Line specific information

 
Line ID 315E04
Vector Used pAC161
Line Availability available as T3 set from NASC (N430196)
Segregation Analysis 50:18:13
Confirmed for Hit At1g75510
Parent of DUPLO pair 1341
Parent of pair(s) none

Gene hit F10B6

 
Sequence (A. th genome BLAST matches underlined) 
>29-K015824-022-315-E04-8409
TGATCTGAAATTTCCCGGACATGAAGCCATTTACATTGGGATACTTATTACCTTTGGTTT
GGAATTAATCACCTCAAAATGTATATGGCTGGTGCTGAGTATGGGAACATGCCAAAGTGC
TACGCTTTGAACATGTTCACAGACTTTGTTCCGATGGGGGGCTTTTCCGATGTTAATCAA
GGTTTGGATTTTACTTTGTTCTGATTGAATACATTAGATTTTTGTTTCTTCGTTTGCTTT
TATTCTCATACTTGGCAAGCTACACTATGGGATCCTCCCCTATATTGAGAATTTTGTATA
TAATATAATTAAGAATATATGTAGAGTGTTCAGGTTTTATAAGTTTTTTAGTACGTATTA
GAATAATCTATTTAGGGTATCTATGTTTAGTTTATTCTTTCTTTGTAAAAGCTGCAGATT
GTTATAGATTTCTAAATTTCAGTCTTTACTTGGTTATCTTTTTTTGGTCATATCGTTCGT
ACTTCTTAATTATCACACCCACATGCATGAATATTTCAATATTCCCCTTTTTTAGTTAAA
AGACTTTACGGTAAACGAGAATAATTTTTTTACGATCTTGTATAAGACGTTTATTATGAC
GATCATAGTGAATATGCATTTATGAGAATCTCAATGTGATATATGAAAAGAAAAGGAAAC
CTATGGGAT
GenBank Accession AL948800 [GenBank]
Graphic View Graphic view of sequence AL948800 of line 315E04
Predicted Position of Insertion Chr1:5153593 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F10B6
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g75510

 
Sequence (A. th genome BLAST matches underlined) 
>29-K015820-022-315-E04-8409
TGTCATGAGATTTCCNGGACATGAGCCATTTACAATTGAATATACTCATATGACTAATAG
ATCCAGCCCCTAATGCTATGGGATACCGTCCCTATAGTGAGACTGAGTATGGGAACATGC
CAAAGTGCTACGCTTTGAACATGTTCACAGACTTTGTTCCGATGGGGGGCTTTTCCGATG
TTAATCAAGGTTTGGATTTTACTTTGTTCTGATTGAATACATTAGATTTTTGTTTCTTCG
TTTGCTTTTATTCTCATACTTGGCAAGCTACTCTATGGGATCCTCCCCTATAGTGAG
GenBank Accession AL948799 [GenBank]
Graphic View Graphic view of gene At1g75510
Predicted Position of Insertion Chr1:28348226 - go to primer design
BLAST e Value 4e-93
Hit Clone Code (BAC ID) F1B16
Hit Gene Code At1g75510 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transcription initiation factor IIF, beta subunit
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37