SimpleSearch - Line and FST details


Line specific information

 
Line ID 318D10
Vector Used pAC161
Line Availability available as T3 set from NASC (N430478)
Segregation Analysis 100:92:64
Confirmed for Hit F14G6
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit F14G6

 
Sequence (A. th genome BLAST matches underlined) 
>76-K015859-022-318-D10-8409
TGTCCTGTAATTTCCCGGACATGAAGCCATTTACATTGAATCTTCAATCCATATCTCTCG
TTACTGCTATTGCGCTATTCGCTGTATGCCTAATATCATCTACTGTTTCAGTTTCGTCTA
TCTGAACTGACCCTAGTGGTATACTCCCCATAGAGAGATCACATTTTGACGAATAAAGAG
ATTAATGTTATCCTTTACAAAATAATGAAATAAGAAAGAAACAGAAGTTTATGTTTGTCC
AATTATCCTCAATGTTTGTTGATATACGAATTTTGAGAATTCAAACTGAATACAAGAAAT
AAAAATGTAGTGAGATAATAATACAAATTTGCATTATTTCTTCCAAGATTGTTTTCTTTA
AGTAAATGAAAAGTATCTTGGATTATTACAGAAATGACCCTAAATCTTTTTGAATTTACA
GTTTGTACCACCACCGAATAAAATAAGAAAAAGTTTCGTTAAATGTTACGAGTGCTCGTT
GAAGACGAAGTTTCGAAGACGACCAACAAAGAGAAAGATCAAATTTTGAGAGGGAAACTA
AAAAGAGGAAGAGAGAAGAAGAAGAAGAAAACCCCCTTGATTAATAAAGTCTCAGACTTT
TTTGATCCATTCCAAAAAAGGGAGTTTATGCCTTGAAGCTGGGAAATCCAAAAATCCGGA
ATTCGTGTAAAACTA
GenBank Accession AL949149 [GenBank]
Graphic View Graphic view of sequence AL949149 of line 318D10
Predicted Position of Insertion Chr1:28733798 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F14G6
Insertion Classification Genome Hit
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g47640

 
Sequence (A. th genome BLAST matches underlined) 
>76-K015855-022-318-D10-8409
CTCTCCTCCCTATATTCCAGTAATTCATCTACTGTTTCCAGTTTCATCAATCTTAGCTGT
CTCTATGGGATCCTCCCTATAGTAGAGAAANANNNNGACGAATNNCCAGATTATTGNTAT
CCTTTACAAAATAATGAACCCACCCCGAAACAGAAGTTTATGTTCGTCCAATCATCCTCA
CTGTTTGCTGATATACGA
GenBank Accession AL949148 [GenBank]
Graphic View Graphic view of gene At2g47640
Predicted Position of Insertion Chr2:19537552 - go to primer design
BLAST e Value 1e-16
Hit Clone Code (BAC ID) T30B22
Hit Gene Code At2g47640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Small nuclear ribonucleoprotein family protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 318E10


Last Updated on 10.06.2021 13:37