SimpleSearch - Line and FST details


Line specific information

 
Line ID 322A09
Vector Used pAC161
Line Availability available as T3 set from NASC (N430825)
Segregation Analysis 50:45:41
Confirmed for Hit At5g17330
Parent of DUPLO pair none
Parent of pair(s) 496, 96957, 96960, 96961

Gene hit At5g17330

 
Sequence (A. th genome BLAST matches underlined) 
>65-K015946-022-322-A09-8409
TGATCTGTAGTTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGATGGTCACGGTGA
AGAAGAGCGATAACTTGGACAAGAGAAGAGTGAATCTAACAGCGATAACTTGATGGTCAC
GGTGAAGAAGAGCGATATCGACAAGCAGAGAGATATCATCACTGGCTGGAAGAAGTTTGT
CGCCGACAGGAAGAAGACGAGTGGTATCTGCTAATCGAAATATATTTACTTCAAATGTTT
GAAGACTTTTATTAATAATGCATAATTGCATTGATTTGGATATTTGAATGTTTCATTCCC
CTTTATCGCTGAACCAAGTTTCATTTCCCTTTATTGCTGAAGTAAGTTTCATTTCCCTTT
ATTACTGAACCAAGTTTCATTTGACTTTGATTTGTAATATCTTTTGATATTATTATTATT
GCCGTATTTTTAAATACGTTTATCTGGTTTTTTTTTTGGGGCCCCGGGGCCCCCCCCATA
AAAAAAGGAATAGGAAAATCTGGGGAACTCCCCCNAAAAAGGGGGGAGAAATGGGATACC
TGTTCACCCTCTTCTTCCGAAATGAGACGGGGATAGGTTCCCCGGCTTTTTTTATTTGAT
TATGGGGGCTGTGGACGCCTCCGNCTAATTCGGAGAGGGCTTCCAGACCCCCCCAAATGG
AAAAGCCCCAACCCCAATCAGTAA
GenBank Accession AL949620 [GenBank]
Graphic View Graphic view of gene At5g17330
Predicted Position of Insertion Chr5:5714684 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MKP11
Hit Gene Code At5g17330 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glutamate decarboxylase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g61575

 
Sequence (A. th genome BLAST matches underlined) 
>65-K015950-022-322-A09-8409
TGATCTGANATTTCCCGGACTGAAGCCATTTACAATTGAATATATCCTGCCCTTGAAATT
TTTCCTAAATTCAGTATTACCAATGAATCAGTAGTTCTTCAAGTCCTTGACCAGAAGCTT
GTGAGAGACTCTTAACCGCGATTTCCTGCCCTTCTAATTTTTCCTAAAATCAGTATTACC
AATGAATCAGTTAGTTTACCTATGGGATCCTCNNCTATAGTGAG
GenBank Accession AL949621 [GenBank]
Graphic View Graphic view of gene At1g61575
Predicted Position of Insertion Chr1:22720388 - go to primer design
BLAST e Value 4e-84
Hit Clone Code (BAC ID) T25B24
Hit Gene Code At1g61575 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Serine/Threonine kinase; kinase; ATP-binding; sugar-binding; kinase; carbohydrate-binding protein
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37