SimpleSearch - Line and FST details
Line specific information
| Line ID | 322H07 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N430907) |
| Segregation Analysis | 50:46:38 |
| Confirmed for Hit | At4g14240 At4g16765 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3197, 9601 |
Gene hit At4g14240
| Sequence (A. th genome BLAST matches underlined) | >56-K015950-022-322-H07-8409 CTCTTGACTCATCTAAATCTAACCTTTAGCATACGAAAATGGTAATTTCCATCTTGATCA ACCGTCAGGCATAAACAACATCATACCAGACTACATTCGCAAAACATTCTTGACCAAACA CACTATATTTACCTTGCCAATGGGAAAGGCAGATCGGATAGCAGAGAGTCATTAAAATGC GGACCACNCAGACAAAATTCGCTCCAACCGCGAGTCCATACCTATGGGATCTCCCCTAAT AGTGAG |
| GenBank Accession | AL949722 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:8206350 - go to primer design |
| BLAST e Value | 6e-80 |
| Hit Clone Code (BAC ID) | FCAALL |
| Hit Gene Code | At4g14240 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | CBS domain protein with a domain protein (DUF21) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At4g16765
| Sequence (A. th genome BLAST matches underlined) | >56-K015946-022-322-H07-8409 TGTACTTGCGATATATACGCTCTTATAATATATACTGACAGTTTGAGCTACCAATTCTCT GTATACCCATTACCTTACTAATTCACTCTAGATGCTATGGGATACTCCCTATATGTGAGA GACAAATCGAAACAACCACACATTTGGGAAGATGTCCCTGGAATTAAAGGGTAAGTCTAT GGGATCCTCCCTATAGTGAGANNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNN NNNGNNNNNGNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACNNCNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNN NNNGNCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCNNNNANNNNNNNNAN NNNNNNNCNCNGNNCCCCCCCACAACCCAAAACCCCAACCAACAGCAGCACACAGCACAC CACACCGGAAAACGCACCCCANAGGNAACGGAACCAACACCCCCGCCTAAACCCACCAGA GAAACAACGACAACCCCCAAACCACGAGGACCCCCCAAACCCAAGGGACACAAGCGCAAG AGAAAGGGAAGACCGAACACCGAAAAACGCAACGAGAGGCGCGAGAAACACAGCAAACA |
| GenBank Accession | AL949721 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr4:9430657 - go to primer design |
| BLAST e Value | 8e-27 |
| Hit Clone Code (BAC ID) | FCAALL |
| Hit Gene Code | At4g16765 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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