SimpleSearch - Line and FST details
Line specific information
| Line ID | 323A02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N430914) |
| Segregation Analysis | 50:48:36 |
| Confirmed for Hit | At2g39430 At2g39435 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 12822 |
Gene hit At2g39430
| Sequence (A. th genome BLAST matches underlined) | >09-K015951-022-323-A02-8409 TTTCCCGGACTGAAGCCTTTACATTGAATATATTCTGCTGGTCATGCTCACCATGTAGCA ATACAGTCAGAGAAAGAGTCTGACTTGTTCCGTCCAGGGAACTGGCCAAGTAAAAGCCTT GAGCTCTCCCTATAACGGCTGAGCCAAGCTCGTGGCTTTCGGTTAGCTCATCATCTACAA CGGTTATGGTTCCGAACATGAGATGCTGGAGGGCAGCACCGGGAGGAAGGTTCCCGGCAG TTACAAAAGGGAGACTGTTGGCGCTAAGGGCATCGTTGGAATTTCCGTTAGTGTTTTGGA TGACGGTGGAGGTTTGAGCACCGCCAAGTCCGGTGAGAAGTGGAGCTGTGTTTGGGTTAA TGACACTGTTGATGTTGTTTGAGTTGACCAGTGGGACTCCATTGTCAACCGGGAAAATGC TGTTACTGGCCTTTGAGAATGGTATTCCGTTCACTTCAGTTTGAGCTACTATACCTGTAA CCACACGAGCTGATGGGTGAGATCCGCCTATGGGA |
| GenBank Accession | AL949732 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:16464179 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F12L6 |
| Hit Gene Code | At2g39430 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Disease resistance-responsive (dirigent-like protein) family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g39435
| Sequence (A. th genome BLAST matches underlined) | >09-K015947-022-323-A02-8409 TATCATGAAATTTCCCGGACATGAAGCCTTTACATTGAATATATTCAACAATAAAATTGT AAATATTTGGTAATTGCTGATGTATCATATTTTTTGAATTGAATATACTCTTTCATTTAC TGTTTATTTAATTTAAAAGAGTCCAATAATTTTGGCATGGGACCGTTATATAATATGATA CATCATACATGCAAAGAATATGAAAACGACGTACGTTCTCACTTGGATTCTTATTCAATT TCCCAAAAGTTTAAACGACAACAAACCATTTCTTAGGCTATCATATATAATTTAAGTCAG ATTTATTATATGCAGATTTATTATTTTTAGATTTTGTTTTATTTTAATTTATGTGGTACA GTCACCTGAAGAATGACCCGCTTTCTCCAATCTGCTATGGGATCCTCCCTATAGTGAGAT CTGCTATGGGATCCT |
| GenBank Accession | AL949731 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr2:16466864 - go to primer design |
| BLAST e Value | 4e-87 |
| Hit Clone Code (BAC ID) | F12L6 |
| Hit Gene Code | At2g39435 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
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