SimpleSearch - Line and FST details
Line specific information
| Line ID | 327H10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N431390) |
| Segregation Analysis | 50:47:44 |
| Confirmed for Hit | At1g24120 T4O24 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 252, 3037 |
Gene hit At1g24120
| Sequence (A. th genome BLAST matches underlined) | >80-K015979-022-327-H10-8409 TATCTGTAATTTCCCGGACATGAAGCCTTTACATTGAATATATAGTCGTATAAAACTCCG AGTGATGTCGCTTCTATTGATATGCAGTACTATGCTAGGCGGAGACACCGTTATATATCG TGACGACCATTTGTATGTGCATGCCAACCACCGGGTTCCCCTCGGGAGAGCTTGCCCTTC CGTGACATATATGACTCCTGTTCTTCACCCAATAGGTGGGAAGAGCCTGACGACCGATCA TGATTCCAAAACTATCCCTATGGCTCGTCTGGGGCGGCTATGAGCTAGCCTCTCTATAGT GAGTAGCACAAGTACTTCCCTGTACTCTGTCTCAAACTTTGCCAGCTCTGCTCTTTTAGT GAGTATCTGAGCTTCTACAGACCTGAGGTCTTCTTTTTCTTGCGTAAAAGCGGCAGCACA CAGGACTTGGATTGTGTAGCTCACATTTTTAAAAAAGTTATCACCTGAACAAAGGAAAAT GTCATCAGATGATCACCCAGTTGAATCGAATACTGAATCCAGACAGATATAAAAGGGAGA AGAATAATGAATTTGTAATCAGATAAATAACCAGGGAAACTGACCATAGACAGCCAAGAC ATGCGTGCCGGCCTTTAGCTCCGTTACCTCACATTGCTGAAAACCATCAAGCTTTTTTAA AGAACGCAGTTTCTGGATCCCTTTGCTTGAGCCATCTA |
| GenBank Accession | AL950367 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:8529532 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F3I6 |
| Hit Gene Code | At1g24120 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ARG1-like 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T4O24
| Sequence (A. th genome BLAST matches underlined) | >80-K015991-022-327-H10-8409 ACCTGATATATAGCTTATCAGCTCAACGAAGATGATCCGCTCACCTGAATTACTATTGCT CCTGTGGAAACCTCCTCTATATCGAGGATAGAAAAAGTTGGTGATTTTTGGTTTGATATT CTGTCTTAGTCAGAAGTCATTAAATGCTCAGATCAAAATGTCTTAACATGTTAAATATAT CGCTAAATTCAAAATTTGACCATTTTGATTCAGCAATTAGAATGTGTCGAGGTCATCTGG AGCAATCTGGATATGACTCATCTTCGTGTTTTCATGGGCTTTATATTTACGTCGTATGTA CCTCATCTCCTATGGGATCCTCCCCAAATAGTGAGAANNNNAANAANNTATCGCTTGCAA CAAATGAAAATGTCGTCACATCGACACTTAGCCGAGTCGAATGCTTGAATCCAGACGCAT ATAATTGGGGAGAAAATTAATGAATGTTGCAATCAGATT |
| GenBank Accession | AL950368 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:24975649 - go to primer design |
| BLAST e Value | 2e-129 |
| Hit Clone Code (BAC ID) | T4O24 |
| Insertion Classification | Genome Hit |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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