SimpleSearch - Line and FST details


Line specific information

 
Line ID 328G05
Vector Used pAC161
Line Availability available as T3 set from NASC (N431469)
Segregation Analysis 100:99:74
Confirmed for Hit At5g38710
Parent of DUPLO pair 2006
Parent of pair(s) none

Gene hit At5g38710

Sequence (A. th genome BLAST matches underlined)
>39-K016034-022-328-G05-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACAATATCGAATAATCACTTTGTGCAAGT
CGGATCTACAAACAAACCACTATACATGTTTATAGGTGTAGTCGTGTAGAGGCAAATGGA
GAGAAATGAGGTCAATTGACCCCAATAGTTCTTTGCTATGTTTATATTAATTTTCTGTTG
GATAATTTGACACAAAACTACCTCCACCAGTTCGATTCTTCTATATGTTTTCAGATATTT
TTATTTTTTGAAAAATGATGCCACTATAGGATCCTCCCTTATAGATGAGCCACTCCAAAA
ACGTGGAGTAACCGACCAATTATAACCTTTATAAGAAATACAAATATATAATAAATTAAA
TTACAAAAGAGACTACCCCGTTTAATAAACCTTAAAAAACAAAAAAGAACACCAACTTGT
CTGATTTTTTTTTCGATAACGATTTCTTCTTTGTTTGTTTTAAACGACTTGTCTGAATTT
TAGTTTTTTTTTTTTTTTTTTTTTTTGGGGGGAAAC
GenBank Accession BX285309 [GenBank]
Graphic View Graphic view of gene At5g38710
Predicted Position of Insertion Chr5:15502055 - go to primer design
BLAST e Value 3e-143
Hit Clone Code (BAC ID) MKD10
Hit Gene Code At5g38710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Methylenetetrahydrofolate reductase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details