SimpleSearch - Line and FST details


Line specific information

 
Line ID 338E08
Vector Used pAC161
Line Availability available as T3 set from NASC (N432408)
Segregation Analysis 50:28:26
Confirmed for Hit At3g32047 At5g64600
Parent of DUPLO pair 2655
Parent of pair(s) 81001, 81032, 81040, 81049, 81063, 81078, 81092, 81105, 81113, 81123, 81134, 81139, 81140, 81141, 81142, 81144, 81145, 81146, 81148, 81149

Gene hit At3g32047

 
Sequence (A. th genome BLAST matches underlined) 
>61-K016159-022-338-E08-8409
TGATCTGAAATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGGTGGGACTCTT
CCCAATAATGGGGATCTCTCATCACAGCATAAGCATTAACAACAACGTAGCTGTGTTCTT
TGGTACATAATAGCCTTTAATCGTACAACCTTCTATGGGATCCTCCCTATATGTAGAGAC
CGACCTTGTACTCCTTCCACAAGTGAGTCATTTCTTCATAATATCCAACGCTATGGGATC
CTCCCTATAGTGAGATTGNNCNATGNNATNCTGCCTCTAGTGTGGNACGGCAACTTGCAG
CCTATGGGCTCCGCCCTATAAGGAGAACGGTCCTAATGATGATCCTGCCCGTATTTCGTG
TATACTCTCACCGGTGGTTTCAAAAAACCTAGCCAATTAACCTTGGCTACTGGTGTGGCA
CTGGGTGCATTGACCGCATCTCTTGGGGTTCCACGCCACTCTTTACCTTGGCACCCTATT
ATACATTCCGCCGGCCCCAACTGTATCCAGGTGTACCTGACCCCATTCCGGCCA
GenBank Accession AL951780 [GenBank]
Graphic View Graphic view of gene At3g32047
Predicted Position of Insertion Chr3:13062445 - go to primer design
BLAST e Value 1e-37
Hit Clone Code (BAC ID) F1M23
Hit Gene Code At3g32047 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cytochrome P450 superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g64600

 
Sequence (A. th genome BLAST matches underlined) 
>61-K016137-022-338-E08-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGATTCAATTGGGT
CATTATTTGCAAGGCGAGAATCTGATTTTGCGACATGGATGACCTGCATTGTTATTATTC
TATCAGCAGTTGAATGAAACAGCAAATGCAAAATGTAAAAGAAGTTGCTTAAGACCGACC
TTGTACTCCTTCCACAAGTGAGTCATTTCTTCATAATATCCAACACTATGGGATCCTCNN
CCTATAGTGAG
GenBank Accession AL951779 [GenBank]
Graphic View Graphic view of gene At5g64600
Predicted Position of Insertion Chr5:25826369 - go to primer design
BLAST e Value 7e-92
Hit Clone Code (BAC ID) MUB3
Hit Gene Code At5g64600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation O-fucosyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37