SimpleSearch - Line and FST details


Line specific information

 
Line ID 340E01
Vector Used pAC161
Line Availability available as T3 set from NASC (N432593)
Segregation Analysis 50:48:38
Confirmed for Hit At1g51260
Parent of DUPLO pair 2677
Parent of pair(s) none

Gene hit At1g51260

 
Sequence (A. th genome BLAST matches underlined) 
>05-K016152-022-340-E01-8409
TGTGATCTGTAGATTTCCCGGACATGAGCCTTTACATTGAATATTACTCTTTCTTTTTCT
CCTATTTGCATTCATTTGGTTATACATGAAGATCATTCTTTTGTTTGTGTTCTTCTTGGT
CATTGCAACTATAACAATGCAAATACTAATTCAATCGTCTGAGTCACAACGTTCAACTCC
AGCCAAGAGACCTCTACAAGAACAGCTTATTTCTGCTTAGGACAAAAGAAAACTCTATTT
AAGCCACATATTTTACACTGCATTGTTCCTTCACTCAAATGTAAACATAATTGTTTTTGT
TAGTGTGTAATATGTGTAATAAATGTTAATCTATGGGATCCTCCCCAATAGTGAG
GenBank Accession AL952030 [GenBank]
Graphic View Graphic view of gene At1g51260
Predicted Position of Insertion Chr1:19003621 - go to primer design
BLAST e Value 1e-136
Hit Clone Code (BAC ID) F11M15
Hit Gene Code At1g51260 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation lysophosphatidyl acyltransferase 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T26N6

 
Sequence (A. th genome BLAST matches underlined) 
>05-K016161-022-340-E01-8409
ATTTCCCGGACTGAAGCCTTAACAATTGAATATAACAATTGTTATACTCATTGCTGATCT
TCATTTCTTGCGGTTTGCTGATATTCTTAAAAAATTAGGTTGATTCTTCTCTTAAAGAAT
TACTTGACGTATTATGATAGAAAATATAGTAAATTGGAGAAAATGTACCATTAAAATACG
TTTTCGTATCCTATGGGATCCTCCCCCTATAGTG
GenBank Accession AL952031 [GenBank]
Graphic View Graphic view of sequence AL952031 of line 340E01
Predicted Position of Insertion Chr4:2217591 - go to primer design
BLAST e Value 8e-67
Hit Clone Code (BAC ID) T26N6
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37