SimpleSearch - Line and FST details


Line specific information

 
Line ID 344C02
Vector Used pAC161
Line Availability available as T3 set from NASC (N432954)
Segregation Analysis 50:34:32
Confirmed for Hit At1g74710
Parent of DUPLO pair 12706
Parent of pair(s) none

Gene hit At1g74710

 
Sequence (A. th genome BLAST matches underlined) 
>11-K016232-022-344-C02-8409
TGAGCATTTACATTGATACATTTTAGAATGATAATCATGTTTTTTTAGTCCTCGAAATCT
AATTTAACACTGTTAACTTTTAGTTAGTGTGGCCATGCTAAGATAATTTAGCTATGGGAT
CTCGCCTATAGTGAGATGTTATTAATTACCGTCTCTTTGTAGCGCTTACTCCACACAAAA
TTGTAATATTTAAAAGATTTAAAAACACCAAAAAGAGATAAGTTAGTGTGAATTGTGGAA
GTAACAGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL952543 [GenBank]
Graphic View Graphic view of gene At1g74710
Predicted Position of Insertion Chr1:28071283 - go to primer design
BLAST e Value 2e-30
Hit Clone Code (BAC ID) F1M20
Hit Gene Code At1g74710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ADC synthase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit F8F16

 
Sequence (A. th genome BLAST matches underlined) 
>11-K016232-022-344-C02-8409
TGAGCATTTACATTGATACATTTTAGAATGATAATCATGTTTTTTTAGTCCTCGAAATCT
AATTTAACACTGTTAACTTTTAGTTAGTGTGGCCATGCTAAGATAATTTAGCTATGGGAT
CTCGCCTATAGTGAGATGTTATTAATTACCGTCTCTTTGTAGCGCTTACTCCACACAAAA
TTGTAATATTTAAAAGATTTAAAAACACCAAAAAGAGATAAGTTAGTGTGAATTGTGGAA
GTAACAGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL952543 [GenBank]
Graphic View Graphic view of sequence AL952543 of line 344C02
Predicted Position of Insertion Chr4:15200759 - go to primer design
BLAST e Value 2e-58
Hit Clone Code (BAC ID) F8F16
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37