SimpleSearch - Line and FST details
Line specific information
| Line ID | 348B11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N433335) |
| Segregation Analysis | 50:48:48 |
| Confirmed for Hit | At1g71950 At4g00960 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 12155 |
Gene hit At1g71950
| Sequence (A. th genome BLAST matches underlined) | >82-K016243-022-348-B11-8409 TATCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAAATGGTTTTTGGGCAGCTTACT AAGTTCCTGCAACTTTGCTTGTAAACATGGTCTGACTTGTTTGGTCAGTATTAAACAATT TTACCATCCCAAAATCTGCGATTTTCGGATTCATTGCATCGTCCAATAGAACATTGCTAT GGGACCCTCCCCTATAGTGAGANNNNNNNNNNNNANNNATGATNNNNNNANNANNAANAA NAANAANANGATGAAGAAGGGATAAACTATTGANAAAAGAACAAATGTTTGCATTTCTCT TTTGTATAAAATCTGGGAATTTTTTTTCAATAACGCGTGAGAGGTGACATTTTCCATTTA TGTCACAATTTAAACCGACTCATAAATGGACGGGCTCAAATGGTTAATCCATAATCTGAC GGCTGAATGATGTCCGTATGCAGATAATTTTATAATTCCGCTCATTTTTGTAAGTACCTT GACTACAATGTGACATTTAACTTAAAAAATAAAATGAATCAGCCAATATTTCTAGTGACT ACTTCGATCGTAGCAAAAAAAAATGGTAATTAAAAAGCTAATCCAAATTTCGGAAGCTTT TAGCTTTAATTACAATATTTCCTCATGGAATTAAAGATTTAATTTTTAAGGAATTTTGAA CGCTTCTTAAATTTC |
| GenBank Accession | AL953059 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:27081338 - go to primer design |
| BLAST e Value | 3e-125 |
| Hit Clone Code (BAC ID) | F17M19 |
| Hit Gene Code | At1g71950 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Proteinase inhibitor, propeptide |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At4g00960
| Sequence (A. th genome BLAST matches underlined) | >82-K016247-022-348-B11-8409 TGATCTGAAATTTCCCGGACATGAAGCCTTTACATTGAAATGGTTTTTGGGCAGCTTACT AAGTTCCTGCAACTTTGCTTGTAAACATGGTCTGACTTGTTTGGTCAGTATTAAACAATT TTACCATCCCAAAATCTGCGATTTTCGGATTCATTGCATCGTCCAATAGAACATTGCTAG AGGTGGCTTAAAAGTTACTACAGGGATAACTGGCTTGTGTGACAGAAGAGTCAGAAGCTA CACCGCATCCTGATACCGTCGAGAAGATTCTTCCTATCGCTGGGGAGCCCATATCACCAA GTGACGGAGTGTTCACCCACCAATATGGAACGTGCGTTGAGTTTAGACCGTCGGGATATC CGTTGGTGGCACACTGCAGCTGCCGGGATGGCGATACTAATGCAAGCTATGGGATCCGCC CCNATCAGTGTGGGATCCTCCCNGATAGTGAGATAACGCCGCTGAAACTTGCAACAACAT AGACTCCAGTAGAGACTGAAACTTCAAAACTGAATGAAGAAACACTATGGGATCCTCCCT ATAGTGAG |
| GenBank Accession | AL953060 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr4:415268 - go to primer design |
| BLAST e Value | 1e-71 |
| Hit Clone Code (BAC ID) | T18A10 |
| Hit Gene Code | At4g00960 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Protein kinase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |