SimpleSearch - Line and FST details


Line specific information

 
Line ID 350C02
Vector Used pAC161
Line Availability available as T3 set from NASC (N433530)
Segregation Analysis 50:47:47
Confirmed for Hit At1g59650
Parent of DUPLO pair 2434
Parent of pair(s) 435

Gene hit At1g59650

 
Sequence (A. th genome BLAST matches underlined) 
>11-K016245-022-350-C02-8409
TATCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGCCGGCGCTGCCG
CTTTGCACCCGGAGGAGCTTGCATGTTGGTTTCTACGCAGAACTGAGCCGGTTAGGCATA
TAATTTCCATTGAGAACTGAGCCATGTGCGCCTTCCCCCCAAACGGTGAGCGACGGGGCA
ACGGAGAGATCCACATGGGACTTTTAAACATCATCCGTCGGATGGCGTTGCGATAGAAGC
AGTCGATCCGTGAGATGCAGCCGACGCACCGGGAAACACATATTTCTACATATTTCTATG
GGATCCTCCCCTATACTGAGACGCCTTTGAAACCGATTGAGATGATGACTTTCATAGCGA
TCATGAAGGTACAAGCAAAAGCTTTAACATTCTTTTGCTTCGTCATAGGATCATTATATC
GCTTTTGTTCCAATGTTTACTGGATTTGTTTCAGATACGTTGACAGTGAACGGATGTGAG
CGTATCTCACTATCGAGTATGTCATCTGTTAAAGACTCAAAACTTGGTGCTTCCGCTCGG
AATTCTCTAAACGATGTCGTCTCAGCATCTCAATCAGAGAAGTGCTTTGATTGACACTAA
GCACGCTGATTTCATCGACGCAATATCTTCAAAGGCTGATGGTAGCTCTAATACAGAAGA
AGGGGTGGTGGGAAAACTGCGGGATCCCTTCCCAAGAAATGGTTTGCCTTTGTCTTAATT
CAACTGGTCCCTTCTATTGAAAAGAGAAGGTCTTT
GenBank Accession AL953312 [GenBank]
Graphic View Graphic view of gene At1g59650
Predicted Position of Insertion Chr1:21920770 - go to primer design
BLAST e Value 1e-151
Hit Clone Code (BAC ID) T30E16
Hit Gene Code At1g59650 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CW14 protein (DUF1336)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL953313 [GenBank] AL953312 [GenBank]


Last Updated on 10.06.2021 13:37