SimpleSearch - Line and FST details


Line specific information

 
Line ID 365C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N434969)
Segregation Analysis 50:46:45
Confirmed for Hit At2g44450 At3g14100
Parent of DUPLO pair none
Parent of pair(s) 2911, 2967

Gene hit At2g44450

 
Sequence (A. th genome BLAST matches underlined) 
>03-K026821-022-365-C01-8409
ATTGATAGCAAAGAAAAACGCTTGATCATGATGAGCCAACTCTATTTCTTTATGATCCTC
CCTCTGGTACGCTTGACACACTTATATGTTTTTTCCCCCCTTTGGAAATAATGAAAAATG
GTTTTAGCTATTTTCACAACGAAACCCGATTGATGTATAGCTGATGGAAATCATCTTTCA
ATGTAATTACGTATGGGATCCTCCCTATAGTGAGACCTATTGCTCCCCCCTCTTTCNAGT
TCCCCT
GenBank Accession CR396468 [GenBank]
Graphic View Graphic view of gene At2g44450
Predicted Position of Insertion Chr2:18343638 - go to primer design
BLAST e Value 1e-49
Hit Clone Code (BAC ID) F4I1
Hit Gene Code At2g44450 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation beta glucosidase 15
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g14100

 
Sequence (A. th genome BLAST matches underlined) 
>03-K017044-022-365-C01-8409
TCAAATAGGGAGTCTAAAGACTATGCGATCTCCACTATACCTGAGATCTGTCTGTTAAAG
AGGTAAGGCTGAGTGTTACCCATCTGAATAGCAAGAGCAGCTTCGGGATGAGTGTTATAT
CTCACGAAACCAAAGCCTTTGTCTCGTTGGACACGGACCTCCTCAATAACTCCAGCGCCA
AGAGCATGGAAGTAACGGTGTAGATCAAGCTGAGTTACCTGCAAGATAGATAGCTGTAAC
GATGTACCCGAAATCTACTAATGTAAAACTTCATCAAAGAACCTCAAATAAACTGTTTTT
GTTGTGATAGTATTACAAGGAGCACTTCCTATGGGATC
GenBank Accession BX002550 [GenBank]
Graphic View Graphic view of gene At3g14100
Predicted Position of Insertion Chr3:4675679 - go to primer design
BLAST e Value 2e-160
Hit Clone Code (BAC ID) MAG2
Hit Gene Code At3g14100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA-binding (RRM/RBD/RNP motifs) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37