SimpleSearch - Line and FST details
Line specific information
| Line ID | 372E03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N435667) |
| Segregation Analysis | 50:50:33 |
| Confirmed for Hit | At5g60740 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 2183, 91840 |
Gene hit At5g60740
| Sequence (A. th genome BLAST matches underlined) | >21-K017075-022-372-E03-8409 TGATCTGTAGATTCCCGGACTGAAGCCATTTACATTGAATATATCCAGGATCCCCGGTTG CTTTCTCTCCAATAGTGTAGTTTATCCAGAGAGAAAGATCTTAATGCAGTAATCTTACAC AAGAGAGCTGAAAAAAACAAAAAATTGTTGCCAGAATAGATGAAAGAAGCAAAGTTGTTG TCAAAATAGCTTGAAAGTTTCTACTTACAAACAGCAATAACTGTATATGTATATCCCATG GCACCAAACGTTTCATCGCTCACTTTAGCAAGCGTTCCTAAGCAGATACCAGCAAGTAAA AGTATTAGGTAATCTACAGCTATGGGA |
| GenBank Accession | BX003501 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:24426546 - go to primer design |
| BLAST e Value | 1e-121 |
| Hit Clone Code (BAC ID) | MUP24 |
| Hit Gene Code | At5g60740 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ABC transporter family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX003501 [GenBank] |
Gene hit At2g07783
| Sequence (A. th genome BLAST matches underlined) | >21-K017096-022-372-E03-8409 TTGCTTTCTTCTCTCTGTACTACTGCTTCCTTGACTTTTCTTGCTATAAAATGTTCCTCA ATAGCGCTGATTCTGCAAATATTTCTAACGAAGCAACTGTCTTTTCAAAGCACTATCTAC TGGGGATATCACCCAGCACTATATTTTGTCGAACCATGCTAAGCAAAGATGCACGGTTCC AGGCTTCTTTCCCTCCCCGGGTCCACTATGGGATCCTCCCTATAGTGAGACGCCACGAAN GGGCAGAAACGCACGACCGGGAGGGAGAATGGGGCGCCTGATATAGACGGATGCGGACGG ATAAGGAGAAGAAAGGGGAAAAGCACGAGGGAAGCGGGGAGAGGACCGCCAGGGCAGGCA CCGAGAACGGGGGCTACAAGGGACGGGGAGGGCGAACCACAAGAGGGAACAGAAGATGGC CCACAGCGGCGCGGAAAAAGGGAGAGGGTGGTGACGGCCGGACGAAAGACCAGAGGTACC GACCCACAGGAGGCGAAGAAGGAACAGGGGGGGACATAGGACGGCGGAAACAGGCGGAGA CAGAAGGGGCGGGGGCGAACAAAGGGAAGCCGGGAGGAAAAGGGGCGGCCCACGCNCAAA AACGAAAGGGGAGACAAGACGCAGGAAAACGAGGACGGGAAGGAGGGGACAGACGAGCGC GGCGGAAACGGGGAAGGTGCGAACAAAACAATATCGGGCAACGCATGACAACACAAACCA GGGCACGGTGGGCAGTGGAAATGAATACGGGGCGGGGAGCCAAAAGGACAGAAGAGAGA |
| GenBank Accession | BX003502 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:3299497 - go to primer design |
| BLAST e Value | 9e-33 |
| Hit Clone Code (BAC ID) | T17H1 |
| Hit Gene Code | At2g07783 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | 3' region |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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