SimpleSearch - Line and FST details
Line specific information
| Line ID | 386G09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N437041) |
| Segregation Analysis | 50:48:47 |
| Confirmed for Hit | At3g57130 |
| Parent of DUPLO pair | 12404 |
| Parent of pair(s) | none |
Gene hit At3g57130
| Sequence (A. th genome BLAST matches underlined) | >71-K018253-022-386-G09-8409 TGATCTGTGGATTTCCCGGACATGAAGCCATTTACATTGATATATTCACAGAGCTCGACA TCGGAGGAGTCCAATGCACGTCTCATGCCTCCTGATCTTCTGGTCTTCGAGGTCTAAATG TCGATGCGTTAGGTCATGGTGGTTGCACGGCGTTATGTGAACGGAGAGGCATTGAAGATT TGAGACGGAGCTCCTGCACTACTTGGCTACAGTTCGATTGATAGATGTGTTGGCTATGGG AT |
| GenBank Accession | BX285938 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:21149411 - go to primer design |
| BLAST e Value | 1e-34 |
| Hit Clone Code (BAC ID) | F24I3 |
| Hit Gene Code | At3g57130 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Ankyrin repeat family protein / BTB/POZ domain-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit F5K7
| Sequence (A. th genome BLAST matches underlined) | >71-K018249w-022-386-G09-8409 GACTCAATCTAGATGAGTCCTATGGGATCCTTCATATAGTGAGAGTAATAACAATGTACT CTTTGGAGGAAAACACTTTTGTCTATCCCTATGGGATCCTCCCTATAGTGAGAAATAATG ATATTAATATTGAATTAAATACCTATATGTCACTATTGGATGCTCCCAATCTTCTGAACA TTAATGGCGGTTCTGGAAACACGACCATCGCCACGCACCTATAAGATCCTCAGTGGGGGG TGATATAAAAAACTTCACATTTTATTCCTTTATTTCGCAATGTGAAAAGATAATTTTTTT TTTAGGAACGAAAACGCCAAAAATCAAAAAGAAATGGTAAATGTAACATAAACAACCCTG CAAAACAAAAGAGAGGATATAACGGAAAGTTAAAGGGAACAAATAGGGGGATTATATAAT AAGGGGCCAACATACGGCCGACATGTAATAACACTCAGGGACAAATGGAACCAATGCGCA ACAATCAAATAGAAAGAACAACAAGATTTACGGCGCGATACGAGGGACACGGAGGCGGAA ATGGGACAAGGGTGCCACAATAATATATGAGAGGGGGCGCCGCACAGAACACCGGGAAAT TGAACGTGACGGGTGGAGTAACAGGAAGAAGGTGAAACAACA |
| GenBank Accession | BX285937 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:2347100 - go to primer design |
| BLAST e Value | 2e-06 |
| Hit Clone Code (BAC ID) | F5K7 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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