SimpleSearch - Line and FST details


Line specific information

 
Line ID 396D09
Vector Used pAC161
Line Availability available as T3 set from NASC (N437965)
Segregation Analysis 50:47:31
Confirmed for Hit At4g02420
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At4g02410

 
Sequence (A. th genome BLAST matches underlined) 
>68-K017796-022-396-D09-8409
TTAGATACTGTAGCACTTGTCTCATTGTTAGCCTATGGGATGCTTCGTATAGAGAGACAC
AACAAACCTATGGTATCCACCCTATAGAGAGATTATTGAGCATACTCCGAACATATGGGA
TCCTCCCTATATTGAGAAGTCACTTACATGTGTGACCGGTTCCCAATGTACGGCTTTGGG
TTCCCAATGTACGGGTTCCGGTTCCCAATGTACGGCTTTGGGTTCCCAATGTACGTGCTA
TCCACAGGAAAGAGACCTTTTCGACCTTTTTCCCCTGCTATGGCAATTTGCCCTATGGGA
TCCTCCCTATAGTGAG
GenBank Accession FR809510 [GenBank]
Graphic View Graphic view of gene At4g02410
Predicted Position of Insertion Chr4:1060232 - go to primer design
BLAST e Value 4e-07
Hit Clone Code (BAC ID) T14P8
Hit Gene Code At4g02410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Concanavalin A-like lectin protein kinase family protein
Insertion Classification CDSi
Confirmation Status failed
Other FSTs Supporting this Hit FR809510 [GenBank]

Gene hit At4g02420

 
Sequence (A. th genome BLAST matches underlined) 
>68-K018299-022-396-D09-8409
ATGAGCATCTAACTTTAGATACTGAGCACTTGTCTCATTGTTGGTCTAGCTATGGGATCC
TCCCTATAGTGAGACCAGGCGGGTTTTAAGAGTTTTAATAAGTTTTAAAGAGTTTTAGGC
GGAAAAATCGCCTTTTTTCTCTTTTATATCAGTCACTTACATGTGTGACCGGTTCCCAAT
GTACGGCTTTGGGTTCCCAATGTACGGGTTCCGGTTCCCAATGTACGGCTTTGGGTTCCC
AATGTACGTGCTATCCACAGGAAAGAGACCTTTTCGACCTTTTTCCCCTGCTATGGGATC
CCCCCTATAGTGAGANNNNNNNNNNNNNNNNNNNTTTTTTTTTTTNNNNCCCCCCACCCC
CCCCCNNCNNCCCCNCCCCCTTTNTNTCTTTTCCTCCTCCCCTCCAACAAAACAAAAAAC
TTCG
GenBank Accession BX287033 [GenBank]
Graphic View Graphic view of gene At4g02420
Predicted Position of Insertion Chr4:1064509 - go to primer design
BLAST e Value 3e-08
Hit Clone Code (BAC ID) T14P8
Hit Gene Code At4g02420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Concanavalin A-like lectin protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX287033 [GenBank]


Last Updated on 10.06.2021 13:37