SimpleSearch - Line and FST details


Line specific information

 
Line ID 424D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N440647)
Segregation Analysis 50:30:27
Confirmed for Hit At3g11410
Parent of DUPLO pair none
Parent of pair(s) 2630, 96970

Gene hit At3g11410

 
Sequence (A. th genome BLAST matches underlined) 
>20-K017848-022-424-D03-8409
AAAGATGAGGGAAAATGGTGTTTCCCCACGATCTCTGTTCACTTGATTCTTCTCTGATTA
AAGGTTATGGGGATCTATGGGATCCTCCCTATAGTGAGACTCGTGCATCCGATCTCTGCG
CATGCTATGGGATCCTCACTATAGAGAGAAACCCTAATTAGTAACAAATCACAAACAAAA
GAAAAAAATATTACTAAACAGAGGAAATTAACGTACATGAGAGCAGCCATGGCCGTCAAA
GACACCGTAGAAATGATGATTCTCAGAGTTCCGTTGAAGAAACGAAGGATGAATCGAGAC
AGCGTCTTCCATGTCTCGTCTTCTACCACAAACCGACGTCGTACCGATCTTAGGTACATC
GGAAAAGAAACTCTCTGCTTCCGTAACAGAATTTGAATTCGTAACCGCTGATCTATGGGA
TCCTCCCTATAGTGAG
GenBank Accession BX289228 [GenBank]
Graphic View Graphic view of gene At3g11410
Predicted Position of Insertion Chr3:3585008 - go to primer design
BLAST e Value 3e-134
Hit Clone Code (BAC ID) F24K9
Hit Gene Code At3g11410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation protein phosphatase 2CA
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T10O8

 
Sequence (A. th genome BLAST matches underlined) 
>20-K017810-022-424-D03-8409
TGCGCATCCTCCCTATGCTGAGCGGAGATTTGGCAAGGCAGAGGATTTTGTCTTCTTTGT
GATTACAAACTATGGGATCCTCCCTAATAGTGAG
GenBank Accession BX289227 [GenBank]
Graphic View Graphic view of sequence BX289227 of line 424D03
Predicted Position of Insertion Chr5:181377 - go to primer design
BLAST e Value 7e-21
Hit Clone Code (BAC ID) T10O8
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37