SimpleSearch - Line and FST details
Line specific information
| Line ID | 454C04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N443516) |
| Segregation Analysis | 60:59:56 |
| Confirmed for Hit | At4g34850 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At4g34850
| Sequence (A. th genome BLAST matches underlined) | >27-K018837-022-454-C04-8409 TGATCTGANATTTCCCGGACATGAAGCATTTACATTGAATATATTCAAATGAGTGGAGCT GGAAAAACCACTCTTCTCGACGTCCTATGGGATCCTCCCTATAGTGAGACTCCCTTGATT TCAAAGCGGGTGAGTTCTTCTCACACTCGGTGATGTCTGATAACAATCAATATCATGGAT TGTGCGTCGGCTATCTTTTCACCACATGCCTATGTGATCCTCCGCTATAATCTTTGGACT ATTGATGGACATTCTCATTCATGAACTATGGGATCCTCGCTATCTGAATCTTGCTTTTGG ACCTGGTGTTACATTTGAAGGCATTATCGCTCGAAACCTTGATGTCTGAACAATAAGTTT TTACCTTGCAGATCGAGAAAGAACCCCTTATGCTTTAATAAAGACATGAAGCTAAACATA CGAAATATTTTTTACGATGCTTAAATCTTTCATAGTCTAAAAATATTTCACAAAGCAAGC AACGTAAAATTTGCAATTGAAAAATGAAGAAAAGAGTCGTTATCAGCATTAAAGCCAGGA ATCACGAAGAAGGTTCTTCTTAGCTCATCTCTTTCCAACGTTTTCAACAAGTCCAGGAGT TGGATCTTCTCATAACGGGTTTCATCTGTTTGTCTTCCTCAAGACAAACCATACCAACAT GTGACGGATCTTCCAGCATCATCTTGGCTACTAAGTATCCTGCGACTGACCAAGTCTGTT TTTTACGCGACTGTTTCCCCACGTATCTCCCTACCTTCCATCATAGTATTCAGGCCAGTG GTCCTTATGAAGCCTATGGGACCCCCCCC |
| GenBank Accession | BX292440 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:16609430 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F11I11 |
| Hit Gene Code | At4g34850 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Chalcone and stilbene synthase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | HG968980 [GenBank] |
Gene hit At3g25600
| Sequence (A. th genome BLAST matches underlined) | >27-K018835-022-454-C04-8409 ATTCCTCCGATAGATTCCGCAACTCGAACTTTCCATTATATTAAAGCCTTTGTAACATAA GACAAGCTATGGGATCCTCCCTATAGTGAGATCCGAAGCGCGGTGTCTTCGAATTTAATA AACTATTCCTCTCCGATCTTCCCTATAAAAGACCTAAAACAAAAAAAATCTCTTTCCTTC TTCTTTCTCCATCAATGGCGTCAACAAAACCAACCGATCAAATCAAACAACTCAAAGATA TCTTCGCTCGTTTCGACATGGACAAGGACGGAAGCTTAACGCAGCTATGGGATCCCCCCT ATAG |
| GenBank Accession | BX292439 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:9307146 - go to primer design |
| BLAST e Value | 7e-61 |
| Hit Clone Code (BAC ID) | T5M7 |
| Hit Gene Code | At3g25600 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Calcium-binding EF-hand family protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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