SimpleSearch - Line and FST details


Line specific information

 
Line ID 464A10
Vector Used pAC161
Line Availability available as T3 set from NASC (N444458)
Segregation Analysis 50:40:39
Confirmed for Hit At5g41800 At3g12910
Parent of DUPLO pair 11846
Parent of pair(s) none

Gene hit At5g41800

 
Sequence (A. th genome BLAST matches underlined) 
>73-K019011-022-465-A10-8409
GTTCTTGATCACTGTGAAAATCCGGACGCCGTCACATCCGTTTCCGGGAACTCGCCGCCG
ATGTTCTTGGTATCATTCAAAATCTCTTCTTTGTATTTATTAGTTTGCTTTTTTTGGATC
AATACCAGAAAAGGTTCGGATCTGTGTTTCAATTTGGATACTTTGACTTCTCTGTTAGAT
TCTCCATCATCACACGTGTCTTAATTTACCGCACCTGTCTATGGGATCTCACNTTTTACA
TGGAAACCTACGAGACTTGGCCGGACGAGCTTCGATCGGTTGTGGAATTTGCTTTCCCAC
CTTCTTTTCTTAGTTAGATCTCTATGGGA
GenBank Accession BX291581 [GenBank]
Graphic View Graphic view of gene At5g41800
Predicted Position of Insertion Chr5:16734159 - go to primer design
BLAST e Value 3e-60
Hit Clone Code (BAC ID) K16L22
Hit Gene Code At5g41800 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transmembrane amino acid transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX291581 [GenBank]

Gene hit At3g12910

 
Sequence (A. th genome BLAST matches underlined) 
>73-K019007-022-465-A10-8409
TTTCCCGGACTTATTACCTCATGTCTAAGGTTCTTGATCACTGTGAAAAATCCGGCCGCC
GTCACATCCGTTTCCGGGAACTCGCCGCCGATGTTCTTGGTATCATTCAAAATCTCTTCT
TTGTATTTATTAATTTGCTTTTTTTGGATAAATCCGTAAAGGTTGGATCGTGTTTCGATT
TGGATACTTTGACTTCTTGTTAGATTCGCCATCATCACACGTGTCTTAGTTTACCGTACC
GGCCTATGGGATCCTCCCCTATAGTGAGAACCTACNANACTTGGCCGGACGAGCTTCGAT
CGGTTGTGGAATTTGCTTTCCCACCTTCTTTTCTTAGTTAGATCCCTATGGGATCCTCCC
TAT
GenBank Accession BX291580 [GenBank]
Graphic View Graphic view of gene At3g12910
Predicted Position of Insertion Chr3:4110356 - go to primer design
BLAST e Value 1e-31
Hit Clone Code (BAC ID) MGH6
Hit Gene Code At3g12910 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX291580 [GenBank]


Last Updated on 10.06.2021 13:37