SimpleSearch - Line and FST details


Line specific information

 
Line ID 470E02
Vector Used pAC161
Line Availability available as T3 set from NASC (N445074)
Segregation Analysis 50:40:34
Confirmed for Hit At3g15605
Parent of DUPLO pair none
Parent of pair(s) 1123

Gene hit At3g15605

 
Sequence (A. th genome BLAST matches underlined) 
>13-K019028-022-470-E02-8409
GAATATAGCAAATTTCATAGGAGTGAAGATACGCTAACTTTTTGTGTGTCCTCAGTATAC
AAACACCTATTCTCCACCCCATAAGAACAGGTGACAGACTCGAGATGTATATGGTACTTA
TGCATAATAAACACCTGGAAATACATAATTGGATCAGGATAGTTTTTGATGCAGATTTGT
TCTATGGGATCCTCCCTATAGTGAGCATATACGTGAGAAGTAGAATATAAAAGAGTAGTA
AGTAACCTCTGGCCAGATAACATCAGACAATCTTCATTTAACCGCGACATAGCAGAATCA
GCTGCCTTTGTGGTTCCAAAAATCACAAGAGCCCTGCCTGTTTAGATAAATGCAGTTTAA
TTTGATATATTGACAGTTTTTTTTTTTTTCCCAACCTTTTGGGCCAACCAAAAACCAACC
GGGAGGGGGAAAAAATTTCCTTTCCCCCTTTTGGGGGTTTGGG
GenBank Accession BX293045 [GenBank]
Graphic View Graphic view of gene At3g15605
Predicted Position of Insertion Chr3:5290805 - go to primer design
BLAST e Value 7e-92
Hit Clone Code (BAC ID) MQD17
Hit Gene Code At3g15605 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation nucleic acid binding protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T1J24

 
Sequence (A. th genome BLAST matches underlined) 
>13-K019032-022-470-E02-8409
TGATCCTTGTAGATTCCCGGACTGAAGCCATTTTTACAAATTACCGTCTCATCACAAGAA
TACAGCAAATTTCATAGGAGTTAGGATACACTAACTTTTTGTGTGTCCTTAGTATACAAA
CACATATTCTCCACCCCATAAGAACAGGTGACAACTCGTGAAGCATATGGTAGTTAGCCA
TAAGAAACACCTGGAAATACATAATTGGATCAAGAGAGTTTTTGATGCGATTTGTCCTAT
GGGATCCTCCTCCTATAATGAGAGAAGATGTTTCCGTTTAAACACTGATTGAAAAACCTT
TTCACTGAATCGACGTTTCAATTATTGATAACTTCTATTCCCCTATGGGATCCTCCNTAT
ACTGATATGGTTCCAAAAATCACAAGAGCCCTGCCTGTTTAGATAAATGCAGTTTAATTT
GATATATTGACAGTTTTTTTTTTTTTTCCAAACTTTTGGGGCTAAAAAATCCCAACGGGA
AGGGGGGAAAATTTTCCTTATCCCCTTTTGGGGCTTTGGGGT
GenBank Accession BX293046 [GenBank]
Graphic View Graphic view of sequence BX293046 of line 470E02
Predicted Position of Insertion Chr4:2824654 - go to primer design
BLAST e Value 3e-134
Hit Clone Code (BAC ID) T1J24
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37