SimpleSearch - Line and FST details


Line specific information

 
Line ID 472C02
Vector Used pAC161
Line Availability available as T3 set from NASC (N445242)
Segregation Analysis 50:16:10
Confirmed for Hit At1g69640
Parent of DUPLO pair none
Parent of pair(s) 149

Gene hit At1g69640

 
Sequence (A. th genome BLAST matches underlined) 
>11-K019879-022-472-C02-8409
GGTTAGATCTACCGAGAGTAATCTACCTGGCGGAATCTCGATCGCATATACTTTTGATGT
GATTTTTAACGGCTGATTCGCTAATAAGAATCTCGTACTTACCGTGTTTGATTGTGATTA
CTGTCTATCGATGGCGGGATTGGTTGCTTTGTGTCCTCATTATAAGGATCTGACGACTTT
GAAACGACGCCGTAATAAATGTAAACATATGTGACGAATGAATAGAATTCATCTGTACTA
TGGGAATGCTCCGCTATATGGAGTATTCTGGGATTTATGTAGCGCTCTCCTCTTTAGAGA
GTTATAGATTGCATTCAAAGGTTGAAGAAGAAGAGAAGAATCTTGTATCGAAATCTTCTG
TTGTGAAAGGTGTTCTTGTTCAACAGGTTGTTCAAGCTGTTGTCGCTATCCTTTTGTTCA
CGGTACCGTTTTTCTCTTTTCCCATTTTTGAGTTGTTTTGCTTTTGTGAAATTGAAGTGA
AAAGTTAGGTAAAACATATTGGGGAATTTTGATATCTGACGCTGACTTTTTATGTGTGGA
ATTGGATGGTTAAGATTTTTGTTTTTAAAAAGGTTAACTTTTTGGGTTGATGTTGTCTTT
CGACCCATAAAGAGAAATGGGTTATGTATTAATGATCTTAAAGTTGGATCATATATTGAC
TGTTCTAACAATAGTTAAGAGCTTTAGAGGAAAGTATCAATAGGGATTGTTCTGTGATTT
GGCAATAGGGTTTAGACTTGGCAGACTTA
GenBank Accession BX531118 [GenBank]
Graphic View Graphic view of gene At1g69640
Predicted Position of Insertion Chr1:26195675 - go to primer design
BLAST e Value 6e-157
Hit Clone Code (BAC ID) F24J1
Hit Gene Code At1g69640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sphingoid base hydroxylase 1
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX531118 [GenBank]


Last Updated on 10.06.2021 13:37