SimpleSearch - Line and FST details


Line specific information

 
Line ID 475D06
Vector Used pAC161
Line Availability available as T3 set from NASC (N445546)
Segregation Analysis 50:45:40
Confirmed for Hit At3g59440
Parent of DUPLO pair 2698
Parent of pair(s) none

Gene hit At3g59440

 
Sequence (A. th genome BLAST matches underlined) 
>44-K019271-022-475-D06-8409
ATGAGCATTTACAATCGTTGGATGATCATCCATTAATTGACCTATAGGATCCTCCCTATA
GTGAGTCGTATTACTCACACACTGCCTGGATGATTAGTCCATTCATAGACAATATTGATT
TCGAGTTCCTCTGTATACCAAACTAACAGAAAAACTCTCTCCATTTCTGTTCTCAACAAA
GCCAAGAGTTATGGTGAGAGTCTTTCTTCTCTACAACCTCTTTAACTCCTTTCTTCTTTG
TTTACTTCCCAAGAAGCTAAAAGATTACTTCCCTCCTTCTTGGTACATCGAAGATAACAA
CCCGCTATTATACTGATGAATCGGAAACTGAATCTCCGGTAGATCTAAAACGAGTGTTTC
AGATGTTCGACAAGAACGGAGATGGACGCATCACAAAGGAAGAGCTGAACGATTCTCTAT
GGGATCCTCCCTATAGTGAGCCGGTATTACTC
GenBank Accession BX293125 [GenBank]
Graphic View Graphic view of gene At3g59440
Predicted Position of Insertion Chr3:21970271 - go to primer design
BLAST e Value 7e-129
Hit Clone Code (BAC ID) F25L23
Hit Gene Code At3g59440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-binding EF-hand family protein
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX293124 [GenBank] BX293124 [GenBank]


Last Updated on 10.06.2021 13:37