SimpleSearch - Line and FST details


Line specific information

 
Line ID 484B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N446391)
Segregation Analysis 50:38:35
Confirmed for Hit At5g11470
Parent of DUPLO pair none
Parent of pair(s) 1123

Gene hit At5g11470

 
Sequence (A. th genome BLAST matches underlined) 
>82-K019730-022-484-B11-8409
AATTGATATATCCTGATACTCTATATAAGAGACGATGATGCTCAAGCAAGCTGCGAATAA
GGCTCTATGGGATAACTCCCTATAGAGAGAGAAAAGGACACTATTCCTCATATTGGTAAG
CTACCATTTTACTCACCGGGTTCTAATTTATGATTCTCACATACTATAAATGGAATGAAG
AGCACCTCATATTGTTTGATATACAGGTGAAGCTTTGGTCATTTTCAAAACAAGAGAAGT
TGCAGAAAGGGTGATTAGAAGGCTATGGGATCCTCCCTATAGTGAGANACCCTGAATNGG
NANCTCCCATTTGGACGTGAATGTAAACACGTTGTGGTATCGTGCCCACACTACCCCGAC
GCGGCATGGGACCTTGCCATTTGAACTCGACGGTTACCGGAGAAGCAGAGCAATCCCCGC
GGGGGGGGGGATAGAAAAACCCTCTCGGCCTACCCCGTTAAAACCCGCCCCCCGCGTATT
GTATTAGCCCCCCCCGTAATTATCCGCGGGGGCGCCAATGAAGGGCGGGGGCAGAAGGCA
GACTCATGTACGGCGCCGCGCGGGGAGGCCCCCTACTATCCGCCGCGTAGTATTGGGGGG
CACCGCCCGTTTTTAGGCCCCCCGCGATTATAATATAATAAGTAAGGCGAGCCCGGCCCC
CGGCGCGGAAACAAGAAGATTAGAGAGAAAAGGAGGGGGCGGGGGCGGCGCAAGAATAAA
ATTTATGGTTATACA
GenBank Accession BX531821 [GenBank]
Graphic View Graphic view of gene At5g11470
Predicted Position of Insertion Chr5:3664125 - go to primer design
BLAST e Value 4e-87
Hit Clone Code (BAC ID) F15N18
Hit Gene Code At5g11470 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation bromo-adjacent homology (BAH) domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX531821 [GenBank]


Last Updated on 10.06.2021 13:37