SimpleSearch - Line and FST details


Line specific information

 
Line ID 492C04
Vector Used pAC161
Line Availability available as T3 set from NASC (N447164)
Segregation Analysis 50:26:4
Confirmed for Hit At3g06180
Parent of DUPLO pair 12082
Parent of pair(s) none
Note

Gene hit At3g06180

 
Sequence (A. th genome BLAST matches underlined) 
>27-K019641-022-492-C04-8409
CTGAGCATTTACACTTGATATATTCATGNACTTGGACCTTGTTTTCATGGTCATTTCTGG
CTTCTTTGACTTTCACCTTGAGTATTATTATACAGCCTATGGGATCTTCCCTATAGTGAG
ACTATGGGATCCTCCCTATAGTGAGNTNTNNNANNNTCNNNNTTNNNNNTTNNNNTNTNT
TTNTATAANTNACTGTTGCTCCCTCCAGATAGAGAGTGNTTGCCTCCCNAAAGTCTCGAG
AGCCGCCGACCGAACTTTCTTGTCCCTGTGGTACCCACCCGCGACGATATTAGCGCC
GenBank Accession BX532532 [GenBank]
Graphic View Graphic view of gene At3g06180
Predicted Position of Insertion Chr3:1873075 - go to primer design
BLAST e Value 7e-18
Hit Clone Code (BAC ID) F28L1
Hit Gene Code At3g06180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein L34e superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g11260

 
Sequence (A. th genome BLAST matches underlined) 
>27-K019647-022-492-C04-8409
GAGCATTTACATCTGATATATCTATGNACTTGGACCTTGTTTTCATGGTCATTTCTGGCT
TCTTTGACTTCAACCTTGAGTATTATTATACAGTCTATGGGATCTTCCCTATAGTGAGAG
NAAGCNACCCTCTCCTTACCCCTTTTTTTTATCTTCCCTATAGATATTCCCTCTGTCATA
TTCTACCCCTTTGATCCTCCCTCCCGCCCAAAAGAGAGTGCCCCCGAAGAGAATCGAGAC
CCGCCGTCCGAACTTTCTTGTCACGGGGGAAGCCACCAGCGACGAAATTAGCGCCGCTAT
GGTATCCTCCCTATAGCGAGANNNCNNTANNNNANACTACTCCATTTTTTTTTTCTCCCC
CCCCCCCCCCGGCCGAGACGGCGAAAAAAAGCGACGGGAAAATTACGCCCCCACCCCAAA
AATAAATCGCGGTGGGGGGGCGAACATAAGAAGGCGTCGCCGCCTCCCCCGGCCGTAAAT
TTAAAACACCCCGGTTGCCACCTTAAAATAACTCCGCGCCCCCCCCCCCCCCGCAGGCAA
AACACACCAAACCAACAACCT
GenBank Accession BX532533 [GenBank]
Graphic View Graphic view of gene At1g11260
Predicted Position of Insertion Chr1:3778300 - go to primer design
BLAST e Value 1e-28
Hit Clone Code (BAC ID) T28P6
Hit Gene Code At1g11260 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sugar transporter 1
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37