SimpleSearch - Line and FST details


Line specific information

 
Line ID 497B06
Vector Used pAC161
Line Availability available as T3 set from NASC (N447634)
Segregation Analysis 50:26:18
Confirmed for Hit At5g37720
Parent of DUPLO pair 12589
Parent of pair(s) none

Gene hit At5g37720

 
Sequence (A. th genome BLAST matches underlined) 
>42-K019683-022-497-B06-8409
GATCATGAGATTCCNGGACATGAAGCCATCTACATTGAATATATCCTGCCGGGGCATCAG
GAGTTGAAGTTGGAACCAGGCTCCATGTTACAAATCTGGACCAGGGTGTGACAAATGAAG
ATATAAGGGTATAATCAGACTTCTATAATTTGTGCATTTGGTTTCTTAGAGGGGAGCCAG
ACACTAAAATGTATCTTCATGGGATCTATGGGATCCTCNCCTATAGTGAGANNATGNGAT
GCNGCCCCACCCANTTTGACCGACATATGCTCCGGTTCCAAAACAAATTCTTTGTACCAA
GGCTATGATGATAAAAGAAAAACCGACGCTCATAGCATGCTGAAGAAATTCCAAATGCAG
CAGGACGTTCATCAATAACTTCATGCATGATACAGTTAAGACTGTGTAGGGGTTAGGAGG
GTAAGTCACTATATTTACTACAACACCACACATCTTTTGAGGATTTGAAACTGTGTGACG
GAAATGCACAACATGTCTAATTGTACTGGAAGAACAAATTTTGATCTTCATCTTACTGAA
GCTCCTCAAGTTCTAAGCACTGTCGCGAAAGCAACCACTAACTTGTCTGCGCAAGTCCTC
ACAATTAACAACCTAAACCACGAAGTACACTGCAACTGCAGGGGTAAGAGGCATTCCTAA
ATGAAAACATCTCCATGGACTA
GenBank Accession BX533020 [GenBank]
Graphic View Graphic view of gene At5g37720
Predicted Position of Insertion Chr5:14982979 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) K12B20
Hit Gene Code At5g37720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ALWAYS EARLY 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX533021 [GenBank] BX533020 [GenBank]


Last Updated on 10.06.2021 13:37