SimpleSearch - Line and FST details


Line specific information

 
Line ID 513H06
Vector Used pAC161
Line Availability available as T3 set from NASC (N449242)
Segregation Analysis 50:38:25
Confirmed for Hit At1g12360
Parent of DUPLO pair none
Parent of pair(s) 1520, 75880

Gene hit At1g12360

 
Sequence (A. th genome BLAST matches underlined) 
>48-K019930-022-513-H06-8409
TGATCTGANATTTCCCGGACATGAAGCCTCTACATTTGATATATCCATGGAGTAAGTCTT
ACTTCTCCTGTATTAGACTGTATGACAGACTCTATCTATTCCTACAGAAGGATCTGATCT
TTCTACTTCAGAATNAGCGAAGATAGTGTGCTCTATTGCCTCATGTTACTACGAAAATAT
TGACGTAGTTCTCTCTTCTCACCCAGGAAGTGAATACTTTGTGCTATTCTCTCCTATTTC
GTTTCTCGTTGCGATGCACCTCTCTTTTCTATGTTAGCTANGTCTACTCGCGATTACTCT
ATTAATATGCATCATTTGATTAACATTTCACAGGATTTAGTGTCTGACGAATTGTCTGCA
CATGTCCAGAGTTATTGCTTCTCTGGCTTTTTCTCTGAGCACCGAATTTATATAAACTCT
TTCTTCTTTTTGCAGATTGCTATGGG
GenBank Accession BX534962 [GenBank]
Graphic View Graphic view of gene At1g12360
Predicted Position of Insertion Chr1:4204118 - go to primer design
BLAST e Value 6e-80
Hit Clone Code (BAC ID) F5O11
Hit Gene Code At1g12360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Sec1/munc18-like (SM) proteins superfamily
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX534962 [GenBank]


Last Updated on 10.06.2021 13:37