SimpleSearch - Line and FST details


Line specific information

 
Line ID 521G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N449998)
Segregation Analysis 50:36:26
Confirmed for Hit At3g57800
Parent of DUPLO pair none
Parent of pair(s) 2455

Gene hit At3g57800

 
Sequence (A. th genome BLAST matches underlined) 
>47-K020205-022-521-G06-8409
ACAGACGCACTCCGCTGCTAACGTCGGCCCCGTCCTACCCTTCTGCCGGTGTAAAAGCTT
TTCTTCCACACACATTTGAGAAAGAAGACGAAGAAGAAGAGAGAATAACTATTCCTTCTT
CGCCAAGTTCTCTGAGCTATAGAAGAAGGAGGGATTTCTTCAGACCGCCATTGTTGCCCA
CCTTCTCTCCTTTCTATTTTTCGCCGCATTTTACTCGCTTACTGACAAAAGTCTTCTACT
CAAGTCTCTCTCTCGCTCTCTTTGGAGGCTCAATTAGGGTTTTGTTGTCGTGAGATTTGA
TTACACAAATTGCTGAATTTGGTTTCGATTATTGGTGTTATTGTTTTCGAAGATTTCCAG
TGAGTTTCCGTTTATGGATCTGACTGGAGGATTTGGAGCTATGGGATCCTCCCTATAGTG
AG
GenBank Accession BX535849 [GenBank]
Graphic View Graphic view of gene At3g57800
Predicted Position of Insertion Chr3:21411708 - go to primer design
BLAST e Value 3e-136
Hit Clone Code (BAC ID) T10K17
Hit Gene Code At3g57800 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX535848 [GenBank]


Last Updated on 10.06.2021 13:37