SimpleSearch - Line and FST details
Line specific information
| Line ID | 532E11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N451035) |
| Segregation Analysis | 100:87:83 |
| Confirmed for Hit | At4g23010 |
| Parent of DUPLO pair | 1610 |
| Parent of pair(s) | none |
Gene hit At4g23010
| Sequence (A. th genome BLAST matches underlined) | >85-K020373-022-532-E11-8409 AGATTAAAATTATATATGACATGAAGCCATTTACACTGATAGCTATCATTATCTAAAATC ACATTTCGTTGTGTGTAGATAACAACGCCTATGGGATCCTCCCTATAGTGAGANNNTTNN NANANNNANTNNTGNNNNNTTTTTGTNNNTTNNNATTTNTATTTGNCCTCTTCNNTATAT AAAACTATANAATCCTTCCTAATACGACCAAAACTTAATTGCCTCCTCATTTTTATGCGA AAACAATAAACAAATTATTCTAATTCTTAAATCTTTATTTCAACGTATCTACATTCACCT CCAAATATACAAACTATGGGATCCTCCCTATGGTGGACTACTCTGAATTGGTAGCGCCTA TTTGGACGGCAATGTACACCTNATTCGATTTCGGAAATCTTTATTTCNACNNGNCNACNT TC |
| GenBank Accession | BX546674 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:12060630 - go to primer design |
| BLAST e Value | 2e-11 |
| Hit Clone Code (BAC ID) | F7H19 |
| Hit Gene Code | At4g23010 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | UDP-galactose transporter 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit MKD15
| Sequence (A. th genome BLAST matches underlined) | >85-K020364-022-532-E11-8409 TTATCTAAAATCACACCTCGTCGTGTGTAGATAACAACGGTTATGGGATCCTCCCTATAG TGAGATCTTTTCTAAATGGGCTTATGATTTANATATGACGGTCCAATTCAAAATTTTGGC TTTGCCGGATATTTCCAACGTACATCAACTCATCATTCCAAAAGGCTGCTATGGGATCCT CCCTATAGTGAGTAANATTTTGCCAATTTTTATGTATTAAAGTTTGTTTGTATTCTAGCG TCATGTTTTCATTCCATGTGATCATTTTTACTTCCTTTTTTGGGATCTCTAATATTATAA CTTTAGCATGTGATTTAACCTTTAAGAAATTAAGGTCTTTGTTGACCGATGAATTATCTA TTCGTAAATAGCTTCTTAATTTCAAATTAAAGGAATGGAANAANATATTTTGCANNTATG GGATCCT |
| GenBank Accession | CU589502 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:7860056 - go to primer design |
| BLAST e Value | 8e-72 |
| Hit Clone Code (BAC ID) | MKD15 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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