SimpleSearch - Line and FST details
Line specific information
| Line ID | 556B06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N453298) |
| Segregation Analysis | 50:47:45 |
| Confirmed for Hit | F19I3 At1g43620 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit F19I3
| Sequence (A. th genome BLAST matches underlined) | >42-K025925-022-556-B06-8409 AGCCATTTACATTGAATATATCCTGAAGAAGTATCTAGATGTGATCACTCTTTCACATTA TATGATATTGTGATATACTACTATATAAAGAAAAATAAGTATGGGATCCTCCCTATAGTG AGACCCCCAACACTGGCCCGATCGGTGTTGGACTCTGATGACACAAATGTAATTCATAAA AATATAGGAAGTAACAGGTTTCTGATGGTGAGTAAAACTGTTAAAGATTCCAACACAGGA CACTTCGGTGATGAGTATGACAGAAAGCAACTTAAATGTTATACCCCAGCTTTTAGTCCA GTCGCTGTGGTTCCAACACCGCCATGATGAACCTTTATATCCACAACACAAGAAACAGCC TCAATTAGAAGATAACTCTTCGGAGATGTGAATGTACTAATATATTGAAAATCTAAAGAG GGCTTACCACAGCTGAACATTGAGGAAACAACCAATCGTGAGGACAGTCCTCCACTAACA ATACATTTTCAGGAACTTCAGTAGCAACTGCAAAATGTTAGTTGGTAA |
| GenBank Accession | CR397924 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:14696901 - go to primer design |
| BLAST e Value | 3e-19 |
| Hit Clone Code (BAC ID) | F19I3 |
| Insertion Classification | Genome Hit |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g43620
| Sequence (A. th genome BLAST matches underlined) | >42-K025925-022-556-B06-8409 AGCCATTTACATTGAATATATCCTGAAGAAGTATCTAGATGTGATCACTCTTTCACATTA TATGATATTGTGATATACTACTATATAAAGAAAAATAAGTATGGGATCCTCCCTATAGTG AGACCCCCAACACTGGCCCGATCGGTGTTGGACTCTGATGACACAAATGTAATTCATAAA AATATAGGAAGTAACAGGTTTCTGATGGTGAGTAAAACTGTTAAAGATTCCAACACAGGA CACTTCGGTGATGAGTATGACAGAAAGCAACTTAAATGTTATACCCCAGCTTTTAGTCCA GTCGCTGTGGTTCCAACACCGCCATGATGAACCTTTATATCCACAACACAAGAAACAGCC TCAATTAGAAGATAACTCTTCGGAGATGTGAATGTACTAATATATTGAAAATCTAAAGAG GGCTTACCACAGCTGAACATTGAGGAAACAACCAATCGTGAGGACAGTCCTCCACTAACA ATACATTTTCAGGAACTTCAGTAGCAACTGCAAAATGTTAGTTGGTAA |
| GenBank Accession | CR397924 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:16426031 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T10P12 |
| Hit Gene Code | At1g43620 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | UDP-Glycosyltransferase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |