SimpleSearch - Line and FST details


Line specific information

 
Line ID 556E08
Vector Used pAC161
Line Availability available as T3 set from NASC (N453336)
Segregation Analysis 50:8:8
Confirmed for Hit At1g06680
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g06680

 
Sequence (A. th genome BLAST matches underlined) 
>61-K025924-022-556-E08-8409
ACTTTACATCTGCAAAGCACAAGCTGAAGACTACAGGTGGTTCATGGGACCCGGGAAATT
TGTCCAGAGCGCAGCCACTTCTTTCACTGTTGCTTGATTGAAATCAACACTTCGTACCTC
TGCTCTGCTTGCTTTCTTCATTTGACTCTTGCAAACCATGGAAAATGACACTGAGCTTTT
GAGAACTATCAAGATGATGTTACCTTTTCGACCTCACTTGTGTATGCCACCCTCCCTATA
GTGAGANNNNNNNNNNNNNNNNNNNNNNNCTAAACTAATGGAACCCCCCTAAAATGGAAT
CTTTTTCTTCCCTATATATTCATACTCTTTTATTAAATTTTACAAGGGGGGTGTAAATGT
ATATTCTTTTAAACAATAACCTAATAACTTTATTTTTAATATTTCAGTAC
GenBank Accession CR397956 [GenBank]
Graphic View Graphic view of gene At1g06680
Predicted Position of Insertion Chr1:2049047 - go to primer design
BLAST e Value 1e-70
Hit Clone Code (BAC ID) F12K11
Hit Gene Code At1g06680 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation photosystem II subunit P-1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX651249 [GenBank]


Last Updated on 10.06.2021 13:37