SimpleSearch - Line and FST details


Line specific information

 
Line ID 567A04
Vector Used pGABI1
Line Availability available as T3 set from NASC (N454340)
Segregation Analysis 50:44:36
Confirmed for Hit At4g34620
Parent of DUPLO pair 2149
Parent of pair(s) none

Gene hit F23F1

 
Sequence (A. th genome BLAST matches underlined) 
>25-K021133-022-567-A04-8409
GTAGAGATGATAGAACAATTAATAAAAACATACTTGATTCTGTCGAATTTGAGGCTCACT
CTATCCGCATCTTCTTTGCCTGAAGATGTATGGGATCCTCCCTATAGTGAGCAAAAACGG
AACAAAAAAGATTAAATAGTTCTAAAGAACAAATATTACAGCCCGTCATTAGTTGTCTTG
TTACAAAGGTACATGATGTAGCAATATACTAATGGTACGGGATCCTCCCTATAGAGAGAG
TCTTGTTCCTCCGCGTTTCTCAAGTACCATTGTAAACGAATACACAATATG
GenBank Accession BX652167 [GenBank]
Graphic View Graphic view of sequence BX652167 of line 567A04
Predicted Position of Insertion Chr2:12834266 - go to primer design
BLAST e Value 3e-37
Hit Clone Code (BAC ID) F23F1
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g34620

 
Sequence (A. th genome BLAST matches underlined) 
>25-K021149-022-567-A04-8409
CCATTTACATTGAATATATCATTGAGCAAACAGGAATATGAAGATGATAGAACAAGTAAA
AAAAACATACTTGATTCTGTCGAATTTGAGGCTCACTCTATCCGCATCTTCTTTGCCTGA
AGACGTATGGGATCCTCCCTATAGTGAGAAAAAACGGAACCCAACAGATTAAGTAGGTTC
TAAATAACAAATATTACAGCCCATCATTAGTTGTCTTGTTACAAAGGTAGATGATGTAGC
AATAGACTAATAGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX652168 [GenBank]
Graphic View Graphic view of gene At4g34620
Predicted Position of Insertion Chr4:16535771 - go to primer design
BLAST e Value 3e-37
Hit Clone Code (BAC ID) T4L20
Hit Gene Code At4g34620 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation small subunit ribosomal protein 16
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX652168 [GenBank]


Last Updated on 10.06.2021 13:37