SimpleSearch - Line and FST details


Line specific information

 
Line ID 585B07
Vector Used pAC161
Line Availability available as T3 set from NASC (N456083)
Segregation Analysis 50:49:48
Confirmed for Hit At5g49770
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g49770

 
Sequence (A. th genome BLAST matches underlined) 
>42-K106973-0022-585-B07C-3144
CCTTCGCAGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACC
CGGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTTTGGGTTTGGTGT
GGTGATGCTTGAGTTATTAACCGGTAAAAGTCCGATAGATAGAGGCAGCTATGTTGTGAA
AGAGGTAAAGAAGAAGATGGATAAATCGAGGAACTTGTATGACTTACAAGAATTGTTGGA
CACGACAATTATCCAAAACAGCGGGAATTTGAAAGGGTTCGAGAAGTATGTAGATGTGGC
TCTACAATGCGTGGAGCCAGAGGGAGTTAATAGGCCAACAATGAGTGAGGTGGTGCAAGA
ACTTGAGAGCATATTGCGGCTTGTTGGATTAAACCCTAACGCCGATTCAGCAACATACGA
GGAAGCATCTGGTGATCCTTATGGTAGGGATTCGTTTGAGTACACTGGGGTTTTCCCAAC
TCCAAAACCCAAACCATTTAATTGA
GenBank Accession HG969052 [GenBank]
Graphic View Graphic view of gene At5g49770
Predicted Position of Insertion Chr5:20226878 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) K2I5
Hit Gene Code At5g49770 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX654939 [GenBank]


Last Updated on 10.06.2021 13:37