SimpleSearch - Line and FST details


Line specific information

 
Line ID 609F04
Vector Used pAC161
Line Availability available as T3 set from NASC (N458432)
Segregation Analysis 50:44:44
Confirmed for Hit At3g01680 At1g01700
Parent of DUPLO pair none
Parent of pair(s) 3258, 3316

Gene hit At3g01680

 
Sequence (A. th genome BLAST matches underlined) 
>30-K021864-022-609-F04-8409
TTAGTATTCAGACACACAATCAATTTCGTTCTTAGTACGTACGTATGATCATGTTCCTTT
ACGTACTTGCTTTGATTTTTCAGATGCTTCCGTTGCCCACTGAGGATAAACTGATGCAGT
CAAGCATGATGAGCGTTCTTGATAGTGTCTCCTATGCTATCGATCGTGTTGCCTGCGAGG
TATAGCTACATTCACTTTTTGTTTGCCACAATTCAAGTGATTCTTTGTTTAGACTTTTTT
GGCTCACCAAAATAACATCCAAGTTATTAGGTTTCGTTCGGGCTAAATTCGGTGTGTTTT
GGTTCAGTTTCAGGATATTCAGTCTAAATATAAATATGTTGACCATCTTGGTTCGGTTAG
GTTGCGCAGTTTCCACCTACCCCTATGGGATCCTCCCTATAGTGAGANNNNNNNNNNNNN
N
GenBank Accession BX655935 [GenBank]
Graphic View Graphic view of gene At3g01680
Predicted Position of Insertion Chr3:252182 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F4P13
Hit Gene Code At3g01680 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sieve element occlusion amino-terminus protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g01700

 
Sequence (A. th genome BLAST matches underlined) 
>30-K021863-022-609-F04-8409
AGCCATTTACATTGAATATATCCTGGACATAAAATCATCTTAAGTGTGGTTACCTTTGGA
AGAGTTGCCATGTAAGAATCAGGAATATCCATTTCACCGAGTATGCTGCTATTGATGGCC
ATAGCAGCTTTATGGATTTGATTAGTGCTCTCTCGCTTGCTCTTAAGTTGTTTCCTTGCC
TTCTCTGATAAACCTTGTAATGGAACCAGAGGAATCGGTAACCACCATTTCTCTTCTTTC
CTCTGCACAATCACTTTCCTGAATGATCCAGTTGCGGAACGCGTTGACTTCATCGACAAG
CTTCCTTCTTCTGCATACCAAAACTCTGTCTTTTGAAAACTATCCAATGCCTCCTGCAGA
AAACAAAGAGAATGACTTTTATGAGGAATATTAACCGAGTCAATCTTATTGATGATAGCT
TCTTGTTCTGGTGTAGTAACTACCATAAGCATGGAATCTATGGGATCCTCCCTATAGTGA
GACGTATTACTCNCCCCTTTACACGGAAATGGTAACACACTGTGTTAAT
GenBank Accession BX655934 [GenBank]
Graphic View Graphic view of gene At1g01700
Predicted Position of Insertion Chr1:260095 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T1N6
Hit Gene Code At1g01700 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RHO guanyl-nucleotide exchange factor 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37