SimpleSearch - Line and FST details


Line specific information

 
Line ID 651G11
Vector Used pAC161
Line Availability available as T3 set from NASC (N462483)
Segregation Analysis 50:50:37
Confirmed for Hit At4g24610
Parent of DUPLO pair 2404
Parent of pair(s) none
Note

Gene hit At4g24610

 
Sequence (A. th genome BLAST matches underlined) 
>87-K021264-022-651-G11-8409
TTTCTTCACATATGGTTTTTTCCCTATATTTTCCCTTGCGTCTTTGTTCTTCTCAGCCTA
TGTCGTATCATTAAAACTAACTTCTTTGATCATTACAAAACCTGTCATTCAAGCAGGTAA
AATGGTCTGGAGTCAGGACACAGCATTCAACAACTCCATTCGTTGATGAAATGTACAAGA
GGCTGAACGAAACCATTCAAGACTATCAAGTTATCATTTCCAGATGGCCAGAATATATCT
TTGTTCTGGAGAGTGTAAGTTTACCTGTTCCTTCATAACTTTTGATTTTGGGATTGTGAA
TATATTGCGTATACATTCCACTGCATGTTATAACCGTACAACTTTACTGTATTTATGGTG
TGAATTTGGAGTGAACAGGCTGACACTGATTGTGTTTCTTTACGCCCTTGCTGATGTTAA
AACAGAACAAAGGAAACTCTGGATAAA
GenBank Accession BX660260 [GenBank]
Graphic View Graphic view of gene At4g24610
Predicted Position of Insertion Chr4:12702599 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F22K18
Hit Gene Code At4g24610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pesticidal crystal cry8Ba protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g13724

 
Sequence (A. th genome BLAST matches underlined) 
>87-K021212-022-651-G11-8409
CCATTTACATTAATGAGTATATCACCATTTAGTTCTATGGGATCCTCCCTATAGTGAGAG
CTATGGGATCCTCCCTATAGTGAGACTATGGGATCCTCCCTATAGTGGGCTACACTGAAT
TGGTACCTCCCATTTGGACCTGAATGTAGACACCCTATGGGATCCTCCCTATAGTGAGCC
CCAGTGAATTGCTAGCTCGGGGGGGCCCTACGGTGTCTGCACTTCAAGGAAACTCCCGTA
ACGTCCAAATGGGGGCTACAAATTCACGGAAGAAAAGGATAAAATGGATACAAGAGCACC
AGAAAAGGGGAGGTCCCCAAAAGAGTGGTATAACATCGGGCCAATAAAATGGGGGATAAG
GGAAAATTCATATAGATTGTAAAACCAAATAAAAGTACGCGGGAAGAGTAAGGAAGAGTA
CCAAAACAAGCCGGATAAAACAGATCGGCCAAAAGTGGAAGGGACACCAAAACAGAAAAT
GAGAAGTGGACA
GenBank Accession BX660259 [GenBank]
Graphic View Graphic view of gene At3g13724
Predicted Position of Insertion Chr3:4496874 - go to primer design
BLAST e Value 3e-06
Hit Clone Code (BAC ID) MMM17
Hit Gene Code At3g13724 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation miRNA
Insertion Classification TS2TE
Confirmation Status failed, line belongs to a contamination group, please check line 549C05


Last Updated on 10.06.2021 13:37