SimpleSearch - Line and FST details


Line specific information

 
Line ID 658F06
Vector Used pGABI1
Line Availability available as T3 set from NASC (N463138)
Segregation Analysis 50:44:41
Confirmed for Hit At2g36390
Parent of DUPLO pair 2494
Parent of pair(s) none

Gene hit At2g36390

 
Sequence (A. th genome BLAST matches underlined) 
>46-K021134-022-658-F06-8409
TATTCTGTCCAACCTTCTGTGGAGATCCCATGTGATGTGTTATATTATGACCCTCCTGAG
GAGGTATGGGATCCTCCCTATATTGAGAAACTACCCACACTTTACCTAATATATAGATAG
ATTTGTCTATAGATGACTGGTGATTTCTACGGGTATTCCTGTTTGATATCCTCCCAAGAT
TGAGCTAACAATAAATTGAAAACAATTTTGGTGAATGTATTTTTAAAAGCCTAATTGCTA
CTCTATCGTTAGTTTTTTATTTGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX660698 [GenBank]
Graphic View Graphic view of gene At2g36390
Predicted Position of Insertion Chr2:15266755 - go to primer design
BLAST e Value 1e-05
Hit Clone Code (BAC ID) F1O11
Hit Gene Code At2g36390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation starch branching enzyme 2.1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T22C2

 
Sequence (A. th genome BLAST matches underlined) 
>46-K021150-022-658-F06-8409
ATTTACATTGAATAATCCTGGATTTTGGTTTTAGGAATTAGAAATTTTATTGATAGAAGT
ATTTTACAAATACAAATACGTACTAAGGGTTTCTTATATGCTCAACACATGAGCGAAACC
CTATAAGAACCCTAATTCCCTTATCTGGGAACTACTCACACATTATTATAGAGAGAGATA
GATTTGTAGAGAGAGACTGGTGATTTCAGCGGGCATGCCCGTATGGGATCCTCCCTATAG
TGAGANNNNNNNNNATCCACAATAATTTTGGAGAATGTATTTTTAAAAGCCTAATTGCTA
CTCTATCGTTAGTTTTTTA
GenBank Accession FR814220 [GenBank]
Graphic View Graphic view of sequence FR814220 of line 658F06
Predicted Position of Insertion Chr3:12795262 - go to primer design
BLAST e Value 4e-21
Hit Clone Code (BAC ID) T22C2
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit FR814220 [GenBank]


Last Updated on 10.06.2021 13:37