SimpleSearch - Line and FST details
Line specific information
| Line ID | 691G02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N466314) |
| Segregation Analysis | 50:42:41 |
| Confirmed for Hit | At2g09970 |
| Parent of DUPLO pair | 11794 |
| Parent of pair(s) | none |
Gene hit At2g09970
| Sequence (A. th genome BLAST matches underlined) | >15-K024531-022-691-G02-8409 CACATAAGCATTATAATAATTAGTTTGGGTTAATTAAGCTCAGCTAATTTGGGCTATGGG ATCCTCCCTATAGTGAGATTAAATAGACGATGATGCATAAATCTAAGCATTCTTGGTGAA TCGAAGCTTTTTCTCAAGATCTGTCACATCGAAGAGATCAAATGTCTTGTGAGATTCAAT GATGGTCTCGAGATATTCAAAATTAATATAAATGGACGTGTGTCAAGACAGAACTTCTTA GCTAGGTCATAAAATATAAAACGAACAACAGTTAAATAAATTAAGAGTAAATAAGACAAA GAGGAAACCCACCTAAAAGAAGAAGCAGAATTATTAAAAAAAAAGTGAAAGACGTATGAG TAGAGAGAATGGAATAAAAAAGAAATGAAGAAAAAGTATTATAAAATAACAAGAAAAGCA ACGCGGGAGAAAAACGAAAAGAAAAAGATGTAGATCCAAGAAAAAATAAAAAATAGTCGG GGCGCAATAGATTAAGAAAAATAACAAC |
| GenBank Accession | BX943706 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:3780212 - go to primer design |
| BLAST e Value | 1e-27 |
| Hit Clone Code (BAC ID) | F7B19 |
| Hit Gene Code | At2g09970 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | DUF1677 family protein (DUF1677) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g13090
| Sequence (A. th genome BLAST matches underlined) | >15-K024535-022-691-G02-8409 ACATTATGTAAATTTGACGATATTTAATGCTCACCTTTANTCGCGATATTGATATTGCAC CTTTTAATTGTATATAAGAAAGGTTGGTAAAATAATTTATAAACTCAGCATTATTTGTTA TTTTTTCATGAATTTAATGCAAACTATGGGATCCTCCCTATAGTGAGANNNAANNNNCCC NNNNNTNNNNNNNNNTTTTTGGGGGGGGGGGGGGGGGCATACCCAAACCTCCAATAAAAT AGACATACCAAATCCCAAAACAACCCAACCCCCCCTACCCAACATACACAACACCACACG CATCCCACCCTTCACGTACCAAAAAACACAGCTTCTC |
| GenBank Accession | BX943707 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:4154905 - go to primer design |
| BLAST e Value | 9e-41 |
| Hit Clone Code (BAC ID) | T19L5 |
| Hit Gene Code | At5g13090 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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