SimpleSearch - Line and FST details


Line specific information

 
Line ID 694C03
Vector Used pAC161
Line Availability available as T3 set from NASC (N466555)
Segregation Analysis 50:45:42
Confirmed for Hit At2g45960 At3g25860
Parent of DUPLO pair none
Parent of pair(s) 2270

Gene hit At2g45960

 
Sequence (A. th genome BLAST matches underlined) 
>67-K024557-022-694-C09-8409
ATGATTTTCTGTATTTTCCTACCTGTCATAATCTACAGTTTAAACGTTAAAAAATGTCCA
CAATTTTATTTATTTTATTAGGGTACAATAACGACATTTGATTAGAGTAAAGAAAATAGT
TGCAAAGCGGGATTTGAAACTCTGTCCACATACTTTAATTATCATTAATCAATAACAAGC
ATTATCAGTATTCAGCAGCAGCAAAGATGATAACGTTAATTATACTATCATGCAATTAAG
TTAACTAATTAACTATCATCTTGTTTATGTTTTAATTTTGTTTCCATCATCTTCCAACCT
TGAGTTTCGGTCACTATAAAAAGCCACCACTCTCTCTGCTTCTCTGCAACACATAACCCA
CTCACAGAAAAACCTATGGGATCCTCCCTATAGTGAGACNAAGTGATCCCCCCTCT
GenBank Accession BX944014 [GenBank]
Graphic View Graphic view of gene At2g45960
Predicted Position of Insertion Chr2:18910046 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F4I18
Hit Gene Code At2g45960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation plasma membrane intrinsic protein 1B
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g25860

 
Sequence (A. th genome BLAST matches underlined) 
>67-K024552-022-694-C09-8409
ATTTTGCGTGCCGTCATGGTTGATGATAACGCCGGCATGAAAATTTCTCGAATCTTAGAG
CGGACCGTCATTGAACGACGGTGAGAAGTCGCCGGAGTCGGGAATCGGAAAACTGCGCTG
CTGACGTATGACTTTACTGATGATTCGACCGAAACGCGCATTTTGGATATTGTTAAAGAA
CCGGGATGATAACGCTAATTACACGAACATGCCATTGAGGTATCGGAGCCACGGGACCCC
TCCAAATGGGGCGGAGGATACACGGGAACCCTCCCAAGTGGGCGGAGATTATGACGGTTT
GTGCTCTCATATCCATGAATCCCGACAGTTTGAGCTACCAATTCAGTGTAGCCCA
GenBank Accession BX944013 [GenBank]
Graphic View Graphic view of gene At3g25860
Predicted Position of Insertion Chr3:9460868 - go to primer design
BLAST e Value 9e-41
Hit Clone Code (BAC ID) MPE11
Hit Gene Code At3g25860 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 2-oxoacid dehydrogenases acyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37