SimpleSearch - Line and FST details


Line specific information

 
Line ID 782G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N475054)
Segregation Analysis 50:29:18
Confirmed for Hit At1g18870
Parent of DUPLO pair 12706
Parent of pair(s) none

Gene hit At1g18870

 
Sequence (A. th genome BLAST matches underlined) 
>47-K024966-022-782-G06-8409
CTTGATTGTATATCCGTGCTACACTGAAGCTGAATCTATCATGTGCACTGCATATGCCTT
TGAAACGCGGCTATATGATCTCCATTCGGCAGGGAAGGGTTATCCATGGCTAATCTCTTC
TGACGATCATTCCTCACAAGTCCGTTCCTCCAAGGTCTGCATGTTTGGACCCAAAACATT
TCTGTATAAGCTGAATATGAACACAAAATCCAAATATCAAACGAAGAGTACCAAAATACC
TATGGAATCCTCCCTATAGTGAGAAATTCTTTTTTCCGAAAAGACAGTGAAAGAAAATTT
GAAGAGCATCGGAATCAAATTATGTTATACCAATTTGCTTAGTCACAAGCCTTTGAGATC
CTCCCTATAGAGAGAGGGGTATATTTATTGGAAAAGGGTAAATGAGCGAATGG
GenBank Accession BX947655 [GenBank]
Graphic View Graphic view of gene At1g18870
Predicted Position of Insertion Chr1:6518961 - go to primer design
BLAST e Value 2e-35
Hit Clone Code (BAC ID) F6A14
Hit Gene Code At1g18870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation isochorismate synthase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g24280

 
Sequence (A. th genome BLAST matches underlined) 
>47-K024966-022-782-G06-8409
CTTGATTGTATATCCGTGCTACACTGAAGCTGAATCTATCATGTGCACTGCATATGCCTT
TGAAACGCGGCTATATGATCTCCATTCGGCAGGGAAGGGTTATCCATGGCTAATCTCTTC
TGACGATCATTCCTCACAAGTCCGTTCCTCCAAGGTCTGCATGTTTGGACCCAAAACATT
TCTGTATAAGCTGAATATGAACACAAAATCCAAATATCAAACGAAGAGTACCAAAATACC
TATGGAATCCTCCCTATAGTGAGAAATTCTTTTTTCCGAAAAGACAGTGAAAGAAAATTT
GAAGAGCATCGGAATCAAATTATGTTATACCAATTTGCTTAGTCACAAGCCTTTGAGATC
CTCCCTATAGAGAGAGGGGTATATTTATTGGAAAAGGGTAAATGAGCGAATGG
GenBank Accession BX947655 [GenBank]
Graphic View Graphic view of gene At5g24280
Predicted Position of Insertion Chr5:8251886 - go to primer design
BLAST e Value 3e-65
Hit Clone Code (BAC ID) MOP9
Hit Gene Code At5g24280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation gamma-irradiation and mitomycin c induced 1
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit BX947655 [GenBank]


Last Updated on 10.06.2021 13:37