SimpleSearch - Line and FST details


Line specific information

 
Line ID 787F01
Vector Used pAC161
Line Availability available as T3 set from NASC (N475517)
Segregation Analysis 50:49:48
Confirmed for Hit At3g06860
Parent of DUPLO pair 12725
Parent of pair(s) none

Gene hit At3g06860

 
Sequence (A. th genome BLAST matches underlined) 
>06-K024931-022-787-F01-8409
NAGCCATTTACAATTGAATATCTCCTGGCATACTGTGAATAGAGTATAAAATGGCTTCTA
GAGGACAAGAGAGCTGGTATGTGTGACAAGAGTGCTATGGCATCCTCCCTATAGTGAGTC
CTATTACTCCCCCCTTTATTGGGATTTCGTTACTCTATGCGCCATTCGTATTTTTAATTC
ATGTTGCTTGTGACTGACTTGGATTTTTACGGGGCGATATACCTGAGGGAACCCTTTGGC
ATTCCAAACTTGTTGATTGCCCTGTCGATCAGATAAGCATCTGCTCCACACTCAACAAGG
ATCCTAGCTGCCTGAGTGTCCGGGAAGAGCATCCTCTTCACTGCGGACCCTTAGCCGTTT
C
GenBank Accession BX948131 [GenBank]
Graphic View Graphic view of gene At3g06860
Predicted Position of Insertion Chr3:2165107 - go to primer design
BLAST e Value 9e-38
Hit Clone Code (BAC ID) F3E22
Hit Gene Code At3g06860 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation multifunctional protein 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T8M17

 
Sequence (A. th genome BLAST matches underlined) 
>06-K024947-022-787-F01-8409
GGAAGAAGCCATTTAAATTGAAAAGCTCTTTGCTCATTTTCGTCTTTTACACATCCACTA
AATTTGTCAGGAGTAACACATGCGCATTAAACACTATGGGATCCTCCCTATAGTGAGACG
TAGTACTCCTGGGTTTAGGGGGATTTGGTAATTCGGTGGGTTGGGGGGTTTGGGGTTTTG
GGGGGGTTGGGGCGTGTGGGGGGTTGGGGGGGGGGGGGGGG
GenBank Accession BX948132 [GenBank]
Graphic View Graphic view of sequence BX948132 of line 787F01
Predicted Position of Insertion Chr5:10273292 - go to primer design
BLAST e Value 4e-09
Hit Clone Code (BAC ID) T8M17
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37