SimpleSearch - Line and FST details


Line specific information

 
Line ID 789A10
Vector Used pAC161
Line Availability available as T3 set from NASC (N475658)
Segregation Analysis 50:50:44
Confirmed for Hit At3g54640 At3g54660
Parent of DUPLO pair none
Parent of pair(s) 1364

Gene hit At3g54640

 
Sequence (A. th genome BLAST matches underlined) 
>73-K024934-022-789-A10-8409
NAGCCATTTACAATTGAATATATTCATATTCTCCGTCTTTCATATTCCAATCCGTCTTTG
CCTTGTACATACTCATTCCAATGAATATATTCCAAGCCAAATTGGTACTTTGCCTTGTAC
GGAGAATTAACGTACTTTGCTGATCCATGTAGAATTACACAGTGTTTGGTACACATCCTC
TCAATACACACCTGCAAAATAACCAAAAATGAGTAGACAACACAATCAAACCATAAATCA
TCAAGCAAATGCTTCAAATTCTGGTATAGCTACTACTAAAGTCAAATTCACTATGGGATC
CTCCCTATAGTGAGACTTATTNNTCN
GenBank Accession BX948346 [GenBank]
Graphic View Graphic view of gene At3g54640
Predicted Position of Insertion Chr3:20225107 - go to primer design
BLAST e Value 9e-07
Hit Clone Code (BAC ID) T14E10
Hit Gene Code At3g54640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation tryptophan synthase alpha chain
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g54660

 
Sequence (A. th genome BLAST matches underlined) 
>73-K024933-022-789-A10-8409
ATGCATTGATATATTCGAGTCAACCTCATTCATATTCAGCTCCGTCTTTGCCTTGGAATA
CTGATTCCCATGAATATATTCCAAGCCAAATTGGTACTTTGCCTTGTACGGAGAATTAAC
GTACTTTGCTGATCCATGTAGAATTACACAGTGTTTGGTACACATCCTCTCAATACACAC
CTGCAAAATAACCAAAAATGAGTAGACAACACAATCAAACCATAAATCATCAAGCAAATG
CTTCAAATTCTGGTATAGCTACTACTAAAGTCAAATTCACTATGGGATCCTCCCTATAGC
GAGAAGGAATAATCCTTACGTTACTCCGACTCCTCCACCAACATCGGAAAACATCAAGGT
AAAAGGACTAATACTACCGATTACACCAGCAACAGAACCAATAGACAATATCAACAAACA
CAGGAGAAACTGAACACCAACCTACTAACTAGTACAGCTATCAACATAAACATCCAAATT
CGTGCAATGACCAACATACATACACAACAAAATCAAATAAACCAAAAA
GenBank Accession BX948345 [GenBank]
Graphic View Graphic view of gene At3g54660
Predicted Position of Insertion Chr3:20232405 - go to primer design
BLAST e Value 5e-67
Hit Clone Code (BAC ID) T5N23
Hit Gene Code At3g54660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glutathione reductase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX948344 [GenBank] BX948345 [GenBank]


Last Updated on 10.06.2021 13:37