SimpleSearch - Line and FST details


Line specific information

 
Line ID 797G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N476494)
Segregation Analysis 50:50:3
Confirmed for Hit At5g04140
Parent of DUPLO pair 2817
Parent of pair(s) none

Gene hit At5g04140

 
Sequence (A. th genome BLAST matches underlined) 
>47-K024971-022-797-G06-8409
ATTTAATTGGTATATTTTCACATGTATTCTCATCATGTTGCTTCAGGGCGTTTTGGAGTC
ACACCAACGTTCTTGGTCAATGCAGATCAATTGGAAATCAAAGTTGCACAAGGTGCCAAG
CCTGGGGAAGGTGGTCAGCTTCCTGGAAAGAAAGTTAGTGCGTATATCACTATGGGATCC
TCCCTATAGTGAGACNNANNACTCGGGGGGNTTTGNGTNNTTGTTNTTTTCCCGGCCTTT
TATTTTTTTTGGTTTGTGTTCTTTTCCGGCTCCTCGTTCCTGTGCCGTTGGCGTGTCCTA
TGGGTTCTGTCTGTGATTGGGGGGGGTTTATACAAGAATAAAGATACATATGCTCTAATG
GTAGAGAGCTTGAGCGAACAATTCAGAGGAGCGCATTAGGGATAAGCTCCCAAAATACTA
CTAGGAGATAGGCAAGTCAAACGATCCTTAGTTCCTCTCCAAATTGGTGGGAAATTATGA
GAAAATAACCATTAAT
GenBank Accession BX949315 [GenBank]
Graphic View Graphic view of gene At5g04140
Predicted Position of Insertion Chr5:1135363 - go to primer design
BLAST e Value 2e-72
Hit Clone Code (BAC ID) F21E1
Hit Gene Code At5g04140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glutamate synthase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX949314 [GenBank]


Last Updated on 10.06.2021 13:37