SimpleSearch - Line and FST details


Line specific information

 
Line ID 798F08
Vector Used pAC161
Line Availability available as T3 set from NASC (N476580)
Segregation Analysis 50:50:34
Confirmed for Hit At5g20730
Parent of DUPLO pair 11867
Parent of pair(s) none

Gene hit At5g20730

 
Sequence (A. th genome BLAST matches underlined) 
>62-K025021-022-798-F08-8409
CGTCTTTCATCTCTAAGCTATTATCAAGCCTTCGGCATTGCTCTCTTCAGTGCAGACTCC
ATGTCAGTCTCATCATCTGCAAGAGCACCGGAAATTCCGTCCTTGAGGAGATTCGAAGAA
GTCGTGTCGAAGTGAGGGGGGGGGACAATTTCACTGGAATTAAAAACTGACCACAAAAAT
TAACACTCTTCAAGTTCAAGAATAAAAATAACAAACAGCACAAACAAATTGGGATTAACA
ACAAGAGTTTACCAAGTAATCAAAATCCTACAAGGTAAGAAAAAAAAATTCAAAAGACAT
ATCATCACTAATATACAAAAGAAATGTTAAACAGCACTACCAGAAGTTGAGTAATTAATA
ATCCAGGGAAGGGACAGTAAAAAATAGAATTAAACGATATAATAACTTGGTCCAAAGCCA
GAAGACATAAATTGATAAAATTAGGCAACAGCAGACTAAAGATAAAACACCAATCGTATA
TAGATCAAAACGATCAAAATAAAATATCATATAA
GenBank Accession BX949421 [GenBank]
Graphic View Graphic view of gene At5g20730
Predicted Position of Insertion Chr5:7019082 - go to primer design
BLAST e Value 1e-55
Hit Clone Code (BAC ID) T1M15
Hit Gene Code At5g20730 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37