SimpleSearch - Line and FST details


Line specific information

 
Line ID 817H01
Vector Used pAC106
Line Availability available as T3 set from NASC (N478421)
Segregation Analysis 50:28:27
Confirmed for Hit At3g55620
Parent of DUPLO pair 1374
Parent of pair(s) none

Gene hit At3g55620

 
Sequence (A. th genome BLAST matches underlined) 
>08-K025709-022-817-H01-8409
AATTGATAGTTTAACCGAAGGCGGGAAACGACAATCTGATCCCCGAGTATGGGATCCTCC
CTATAGTGAGAGCCATGTAATTCGTGTTCCTCCAATAGAGGTCTTAACAATAGGGATAAC
ATCTGCTAACTCCGACTCAAAAGCACTACACAAATCATCAAACCAAAAACATCAAAAAAG
TGAAATAGAAGAAGCAAAAACAATACTGAAAACTTTACAGAGAAAAAAAAAAAAGGAAGG
GAACCCCCCCAAAAGGGGGCCGAATAACACATCGCATATTGATAACCCCCAAAAGGTAGA
CTAATAACCTTCCTTGTAATATAAAAACAACAATAATATATAAAAAACAAATAACAACAG
AAGAAATTACTTACACTAATCAAAAACTCAAGTTAAATATAAATTTCAAAAGGGGGGGGA
GTAATAAACAACTCAAAATTTACAACATAATACCTAAATTAAATTCTAAA
GenBank Accession CR399415 [GenBank]
Graphic View Graphic view of gene At3g55620
Predicted Position of Insertion Chr3:20634990 - go to primer design
BLAST e Value 3e-25
Hit Clone Code (BAC ID) F1I16
Hit Gene Code At3g55620 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Translation initiation factor IF6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR399415 [GenBank]


Last Updated on 10.06.2021 13:37