SimpleSearch - Line and FST details


Line specific information

 
Line ID 853D02
Vector Used pAC161
Line Availability available as T3 set from NASC (N481830)
Segregation Analysis 50:49:48
Confirmed for Hit At2g35710 At1g76200
Parent of DUPLO pair 2625
Parent of pair(s) none

Gene hit At2g35710

 
Sequence (A. th genome BLAST matches underlined) 
>12-K025756-022-853-D02-8409
GTCTCTGCAATCCATTCTTGATTTCTCCGTATGGGATCCTCCCTATAGTGAGGAGACACT
TCTGCTGCTGCTGCAACCACCGCATGATACGTCGATAGATACCGCAAACGCGGTGGTGAC
TGGTTCGAGATCGATGTTTGAAAACACGTCGACCGAACCGTAAAAACGCATACCCTTCGA
TGACGTATGGTATCCTCCCTATAGTGAGATCTAAGGTTTCGAGAGAGAGATAATGGTTGT
AGGAGGACATGAAAAAAGGTATAANTTAGNAGGGAGTCAGTGTNAATACTCACATAACTT
GGAACACCGTCACCGGAAAAGG
GenBank Accession FR816695 [GenBank]
Graphic View Graphic view of gene At2g35710
Predicted Position of Insertion Chr2:15014032 - go to primer design
BLAST e Value 2e-23
Hit Clone Code (BAC ID) T20F21
Hit Gene Code At2g35710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Nucleotide-diphospho-sugar transferases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g76200

 
Sequence (A. th genome BLAST matches underlined) 
>12-K025845-022-853-D02-8409
TTTCGTATAATCCGACAGAAGCCATTTCAATTGAAATATACGCGTCTCTGCAAATCCATT
CTTGATTTCATCGGTATGGGATCCTCCCTATAGTGAGGAGACACTTCTGCTGCTGCTGCA
ACCTCCGCATTATACGTGGATACATACCGCAAACGCGGTGTCTGATGTTCGAGACCGATC
TTTGGTAACACGTTGACCGAACTGTAGAAACGCATACCCTTTTATGACGTATGTTATCCT
CCCTATATAGAGATCTAGGGTTTCGAGAGAGAGATAATGGGCGAAGGAAGACTTGGTAGA
GGGAGAATTTAATAGGGGAGTCACTGTCCACACTCCCAAGACTTGGCACACCGTCAACGG
AATAGGTTTGTGCGCCGTTATGAAAAAATGAATGCTCCAAATTGTTATAGACTGGCTAAA
AAAAAGACACATTTAAGAATCTAAGGGAACAACACAATAGTAAAAGTATTGAAGGAACAC
AATGAAATTAGACATAAAAAGAAGTAATAAATCGAAAGACATTATAATGTAATATTA
GenBank Accession CR402243 [GenBank]
Graphic View Graphic view of gene At1g76200
Predicted Position of Insertion Chr1:28593130 - go to primer design
BLAST e Value 2e-29
Hit Clone Code (BAC ID) T23E18
Hit Gene Code At1g76200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NADH dehydrogenase ubiquinone 1 beta subcomplex subunit
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37