SimpleSearch - Line and FST details


Line specific information

 
Line ID 873G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N483787)
Segregation Analysis 50:13:8
Confirmed for Hit At2g01940
Parent of DUPLO pair 11678
Parent of pair(s) 4929, 4937, 4946, 8561, 10159, 97027

Gene hit At2g01940

 
Sequence (A. th genome BLAST matches underlined) 
>23-K026519-022-873-G03-8409
GNAGCCATTTACAATTGAATATAACGTGCACGCTGCATACGTGTTAGCGCACGGCGGGAA
CCGACAAGCATGATCCCCGCGGAAAGGGAACCTCCCTAAAGCGAGAATTTCCATTGATAA
CTGAGCCATGTGCACCTTCCCCCCAACACGGGGAGCGACGGAGCAACGAATTGATCCACA
TGGAACTTTTAAACATCATCCGTCGGATGGCGTTGCGAGAAAACCACTCCATCCATGAGA
TCAGCCGACGCACCGGGCAGGCGCGCAACACTATCCCAAAGTATTTGAACGCACGTATGG
GATCCTCACTATACTGAGTCAAAAAACATTTCAGAAGAAAACATAGTACCCATAAACAAT
GGGTTTGTGATATATGCTCTAAAGGTTATGCTGTTCACTCTGATTACAAAGCTCATCTCA
AAACTTGTGGTATGGAATCCTCCCTATAGTGAG
GenBank Accession CR404853 [GenBank]
Graphic View Graphic view of gene At2g01940
Predicted Position of Insertion Chr2:433092 - go to primer design
BLAST e Value 4e-46
Hit Clone Code (BAC ID) F23I14
Hit Gene Code At2g01940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation C2H2-like zinc finger protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g21950

 
Sequence (A. th genome BLAST matches underlined) 
>23-K026465-022-873-G03-8409
GAGAACTTTTCATTAATGACTGCTCCATGAGGACCTTCCCCCCACCGCTGGGAGCCACAG
CTTGCCGTATTGACCCACGTGTTTACTTACATCCATCCTCCGTCGGAGGGCGTCTTCATA
AAAACCATCTATCCCTGCGATAAGACCACTCTTCGATGAAGCGAGAACCCCTATCATTGA
CTATTTGATTTCGAGTACGAAGGAACCCCCTTTCTCAATAACTTCCTTCACCTCACTTTC
ATCAGGACTGTAATACGGCGAGTTGAAAGATTCCGCATCTGATTCCTTCACGACTCCCTG
CACACTCAAAATACTCCTCCAGTATATTATTATAACTACGATCAAAACTTTTAGGTTACC
GNAAAAATTAAAAAGTGTGACTGTAATAAGTATGGTATCCTCACTATAATGAGACAC
GenBank Accession CR404852 [GenBank]
Graphic View Graphic view of gene At3g21950
Predicted Position of Insertion Chr3:7736181 - go to primer design
BLAST e Value 8e-75
Hit Clone Code (BAC ID) MZN24
Hit Gene Code At3g21950 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37