SimpleSearch - Line and FST details
Line specific information
| Line ID | 880B04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N484400) |
| Segregation Analysis | 50:41:20 |
| Confirmed for Hit | At5g10330 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 12875 |
Gene hit At5g10330
| Sequence (A. th genome BLAST matches underlined) | >26-K026472-022-880-B04-8409 CCATTTACATTGAATAATCCTGATCAATTGGGGAGACTTTCGAAGATTTGACTCTGAAGA ATGAATAGAGAACGATGGAGAGCCCTGAACATTGATCACACCCATCAGTTTTCGTGTCTG CGCATATCAAAGGTGGAATCAGTTCAATCTAGAGGAAACATCTGATGCACATACTCAATT TCACATCTTATTGACAAGTAATACCTGAAAGTTGACAGGAAGAGGGGCAAATGGAGATAA CCCTAAGTAGACGAGAAGGGTCGTGAGCAGGGAGACTAAAGTGACTGAGATCAGTCAAAA GCTTCGGTTTTTCTATGACTCACTTGCGATTCGTGGACAAAGGTGAGCCTTTTTTTTATT CTGAGTGACTGAGAATTGGCGTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | CR405646 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:3249778 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F18D22 |
| Hit Gene Code | At5g10330 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | histidinol phosphate aminotransferase 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T19F6
| Sequence (A. th genome BLAST matches underlined) | >26-K026526-022-880-B04-8409 ATGCAGGTCGACTCTAGAGGATCCCCAATTCCCTGTGGAGTCAAAGATTCATATAGAGGA CCTAACAGACCTCGCCGTTGAGACTGGCGAACAGTTCTTACGGAGTCTCTTACGACTCGT TGACTAGAATAAAATCTTCGTCAACATGGTGGAGCACGACACGCTTGTCTACTCCAAAGA TATCAAAGATACGGTCTCAGAAGACCAAAGGGCAATTGAGACTTTTCCACAAAGGGTAAT ATCCGGAAACCTCCTCGGATTCCATTGCCCAGCTATCTGTCACTTTATTGTGAAGATAGT GGAAAAGGAAGGTGGCTCCTACAAATGCCATCATTGCGATAAAGGAAAGGCCATCGTTGA AGATGCCTCTGCCGACAGTGGTCCCAAAGATGGACCCCCACCCACGAGGAGCATCGTGGA AAAAGAAGACGTTCCAACCACGTCTTCAAAGCAAGTGGATTGATGTGATATCTCCACTGA CGTAAGGGATGACGCACAATCCCACTATC |
| GenBank Accession | FR817023 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr4:12509927 - go to primer design |
| BLAST e Value | 1e-05 |
| Hit Clone Code (BAC ID) | T19F6 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
