DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_055283c
Line Availability available from NASC (N655534) and ABRC (SALK_055283c)
Confirmed for Hit At4g25970
Parent of DUPLO pair 11750
Parent of pair(s) none

Gene hit At2g26135

 
Sequence (A. th genome BLAST matches underlined) 
AGTTAAGGCTAGATCTACTTTGCATCTCAATTAACACNTCNNNCCNTCCTTGTGCCCGCG
AATCGCAACGCTATATTCTGCTGATAACTTGGGCGACTCCTCACTTACCAAACCCTTGGA
GTAAATTAAACCCCCTCCGCTAGACACAAGAACCGACCTCCTCCTACGTGGCGCGGTGGT
CCATGCGTCGGAGCCCCGTGTGGGGGGGGCCCGCGCCCGGGTATGTAGGCCCGGGGGACC
ACAAAGGCGGTGGCTCGCTCGGTAGGGCTGGCCGCGTGACGGCGGCT
GenBank Accession queueing for submission to ENA/GenBank
Graphic View Graphic view of gene At2g26135
Predicted Position of Insertion Chr2:11130282 - go to primer design
BLAST e Value 1e-25
Hit Clone Code (BAC ID) T19L18
Hit Gene Code At2g26135 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box protein with C6HC-type zinc finger
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At4g25970

 
Sequence (A. th genome BLAST matches underlined) 
GTAAACAAACAAGTTTCTCGTCGATTAA
GenBank Accession BH909680 [GenBank]
Graphic View Graphic view of gene At4g25970
Predicted Position of Insertion Chr4:13185229 - go to primer design
BLAST e Value 2e-08
Hit Clone Code (BAC ID) F14M19
Hit Gene Code At4g25970 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phosphatidylserine decarboxylase 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37