GABI DUPLOdb - pair details


Details for pair 807
  
  Pair Info Parent 1 Parent 2
Pair ID 807    
Parent loci   At1g13800 [Araport] [TAIR] At2g26790 [Araport] [TAIR]
Gene Annotations   Tetratricopeptide repeat (TPR)-like superfamily protein Pentatricopeptide repeat (PPR) superfamily protein;
Pair-related paper(s)  
Similarity (TAIRv10) 60.8 %    
Gap (TAIRv10) 12.3 %    
Component 2    
Genetically unlinked Yes    
Assigned allele   SALK_012298 / At1g13800 SALK_028545 / At2g26790
Insertion classification   CDSi TS2TE (5')
Parent line's graphic view   Graphic view of gene At1g13800 Graphic view of gene At2g26790
Parent line's confirm. status   confirmed, show confirmation seq's confirmed, show confirmation seq's
Primer and wt-amplicons   show primer details show primer details
Doublemutant ID 807/2b1.21.5
NASC set ID N2102919
Assigned allele   SALK_012298 SALK_028545
Allele genotype in parent1   Het  
Allele genotype in parent2     Het
Allele genotype in DM1   Het Hom
Comment(s) and/or quirks No homozygous double mutant could be obtained (potential reason unknown, but there may be hints in "Observed phenotype").DNA insertion type of at least one parent allele is not CDSi (mostly caused by a change in the gene structure annotation of the targeted gene).

 

Last Updated on Thursday, 06 December 2018 16:11