DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_003331
Line Availability available from NASC (N503331) and ABRC (SALK_003331)
Confirmed for Hit At3g26932
Parent of DUPLO pair 11778
Parent of pair(s) none

Gene hit At2g18120

 
Sequence (A. th genome BLAST matches underlined) 
GCTACTTTAGACTCATCAGGTTTGGTTTCAGTAGTTTTTCATTGTTGTTGCCTAATAAAT
CTTTCTTTTTACATGATAATGCATCAGTTTTACTTCGATCAAATATCATTTCGAAATTGC
AATAAGCAATCTAAGAAATGTAAAAATGAAATTCCATTTCAAAATGATGAAACTATTAAA
TATTAATGTAAGAAGCTAAGTAAAATAAAGAACAAAAAATTGTGTTTGAAAAATGAACAT
AGTTTTGTTGTTAGGATTTGATAAATGTTTGTTGTGAAGTTTTGGCCCTAACTTTGTGTA
ACTTTGCTAGGGCTAGAGATGGGAGAGACAAGATTTCCAGATGAAGTGAGCTCGGATGCA
CTTTTCCGATG
GenBank Accession ED593210 [GenBank]
Graphic View Graphic view of gene At2g18120
Predicted Position of Insertion Chr2:7877252 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F8D23
Hit Gene Code At2g18120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SHI-related sequence 4
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At3g26932

 
Sequence (A. th genome BLAST matches underlined) 
CTCAGATCCATCAATCTATATACCAATGAAGCT
GenBank Accession ED593209 [GenBank]
Graphic View Graphic view of gene At3g26932
Predicted Position of Insertion Chr3:9930882 - go to primer design
BLAST e Value 3e-11
Hit Clone Code (BAC ID) MQP17
Hit Gene Code At3g26932 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation dsRNA-binding protein 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37