DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_010926
Line Availability available from NASC (N510926) and ABRC (SALK_010926)
Confirmed for Hit At1g01110
Parent of DUPLO pair 11936
Parent of pair(s) none

Gene hit At1g01110

 
Sequence (A. th genome BLAST matches underlined) 
CTATGAGACCGGATCCTCGCTTTAGCTGACTCTGTACTCGCCATGTAATTAGGCAACAAT
GATGCATTATTAACCATTGTGGTACTAATGCTACATCCACTCCTAGCTGTGAAACTATAA
TTGGATCTCAAGCT
GenBank Accession ED571841 [GenBank]
Graphic View Graphic view of gene At1g01110
Predicted Position of Insertion Chr1:54235 - go to primer design
BLAST e Value 1e-70
Hit Clone Code (BAC ID) T25K16
Hit Gene Code At1g01110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation IQ-domain 18
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g64240

 
Sequence (A. th genome BLAST matches underlined) 
TTTAAACTTAATTTATTTTGTTCATTAGTAATACCTTTTAACTGTAAGATAATTTTATTA
AAAATGAATTATTCGTTTGTGTTATGAAATATAAATGCTTAAATATTATCAAAAGTCATA
CTTTTTAATTATTATTTTCCAAATGATAAGCT
GenBank Accession ED571840 [GenBank]
Graphic View Graphic view of gene At5g64240
Predicted Position of Insertion Chr5:25695353 - go to primer design
BLAST e Value 2e-81
Hit Clone Code (BAC ID) MSJ1
Hit Gene Code At5g64240 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation metacaspase 3
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on Thursday, 10 June 2021 13:37